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View Structure Prediction Details

Protein: gi|50508912, gi|...
Organism: Oryza sativa Japonica Group
Length: 479 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50508912, gi|....

Description E-value Query
Range
Subject
Range
SQD2_ARATH - Sulfoquinovosyl transferase SQD2 OS=Arabidopsis thaliana GN=SQD2 PE=1 SV=1
304.0 [0..65] [469..101]

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Predicted Domain #1
Region A:
Residues: [1-479]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAWNTSILL PPPPPLLSRA AVATPALNPY PLRLHRRHPQ KPLCLPSESY PADTDADASS  60
   61 ASLDSRPRRI ALFVEPSPFA YVSGYKNRFL NFIKYLREMG DEVIVITTHE GVPQEFYGAK 120
  121 LIGSWSFPCP WYQKVPLSLA LSPRIIGEVA RFKPDIIHAS SPGIMVFGAL IIAKLLCVPL 180
  181 VMSYHTHVPI YIPRYTFSWL VKPMWLIIKF LHRAADLTLV PSVAIGKDLQ AARVTAANKI 240
  241 RLWNKGVDSE SFHPRFRNDE MRARLTNGEP EKPLILYVGR LGVEKSLDFL KRVMDRLPGS 300
  301 RIAFVGDGPF RAELQLMFTG MPAVFTGTLQ GEELSQAYAS GDVFVMPSES ETLGFVVLEA 360
  361 MSSGVPVVAA RAGGIPDIIP EDQEGKTSFL YTPGDVDDCV SKIERLLTCE ELRETMRKAA 420
  421 RKEMEKFDWR AATRKIRNEQ YSAAIWFWRK KRAQLLRPIQ WVSRRLFRPT PAPSTMNQS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 52.30103
Match: 2gejA
Description: No description for 2gejA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle