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View Structure Prediction Details

Protein: CCB21_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 420 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCB21_ORYSJ.

Description E-value Query
Range
Subject
Range
gi|6331704 - gi|6331704|dbj|BAA86629.1| cyclin [Oryza sativa]
401.0 [0..1] [420..1]

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Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRASENRRL AAVGKPVPGI GEMGNRRPLR DINNLVGAPP HPSAIAKKPM LEKSGKEEQK  60
   61 PALVVSHRPM TRNFAASLTR KEQLDHQVSV ADAAVVCTDP QKNPIPDGTV DDDVESCESN 120
  121 DYIAVDECND TDEDESMMDI DSADSG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [147-420]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPLAATEYVE ELYKFYRENE EMSCVQPDYM SSQGDINEKM RAILIDWLIE VHHKFELMDE  60
   61 TLFLTVNIVD RFLEKQVVPR KKLQLVGVTA MLLACKYEEV AVPVVEDLVL ISDRAYTKGQ 120
  121 ILEMEKLILN TLQFNMSVPT PYVFMRRFLK AAQSDKQLQL LSFFILELSL VEYQMLKYRP 180
  181 SLLAAAAVYT AQCALTRCQQ WTKTCELHSR YTGEQLLECS RMMVDFHQKA GAGKLTGVHR 240
  241 KYSTFKFGCA AKTEPALFLL ESGAGGYNLQ KQPC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.154902
Match: 2jgzB
Description: No description for 2jgzB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle