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View Structure Prediction Details

Protein: gi|50927801, gi|...
Organism: Oryza sativa Japonica Group
Length: 221 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50927801, gi|....

Description E-value Query
Range
Subject
Range
gi|115459798, gi... - gi|115459798|ref|NP_001053499.1| Os04g0551700 [Oryza sativa (japonica cultivar-group)], gi|113565070...
230.0 [0..7] [221..1]

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Predicted Domain #1
Region A:
Residues: [1-221]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLVSHAKI LAPIPRGNRR LAPAPPAAGG FLRALFPSRR SRPPPEKDEL LRLIADQRRG  60
   61 LDTQSDPSRL ADIVSCIDAL AAAAPGSDTV SDADKLSGTW RLLWTTEHEQ LFIVRNAPFF 120
  121 RTAAGDVFQV IDVPGGALNN VITFPPSGAF VVNGSIEIQP PQRVNFRFTR AMLRGSNWEV 180
  181 PFPPFGKGWF DTVYLDDDIR VAKDIRGDYL VVERAPYSWN G

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 41.552842
Match: PF04755.3
Description: No description for PF04755.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle