| Protein: | gi|115459258, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 454 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115459258, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
430.0 | [0..1] | [454..1] |
|
Region A: Residues: [1-297] |
1 11 21 31 41 51
| | | | | |
1 MGGGRVRFNV GGQVFETTTT TLANAGRESM LGALLDSSWN LAPTAGGGGG GGGGGGGGGV 60
61 AEYFIDRNPA CFAVLLDLLR TGSLHVPPQL PEKLLYREAL YYGLLDHVRA ARWGAFDGDR 120
121 LRLAASVPGR APGDGTAIRA APDGGCCVAH GGAVHVYNWM LDERRPVSLD HSQVNDVAYL 180
181 DEATLLIAAR ERLGKCDGGM AAFSAVSGDL RHRFRVAHDR QAKSFTAGAL AFDQDSSIFA 240
241 SCKGRLNEYG IGVWDRATGE QADFFYEPPG CALGDADKLQ WLDATNALMV ATLFPKT
|
| Detection Method: |  |
| Confidence: | 62.69897 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [298-377] |
1 11 21 31 41 51
| | | | | |
1 DNCFIGLLDF RDKNVAWSWS DAGMAASLDD KRVLHAIAME DERSVCVINQ YDDLGFLDLR 60
61 SNAGGVRWSS RSKFMNRKVP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [378-454] |
1 11 21 31 41 51
| | | | | |
1 SEESCYPKLA THGGQLFSSM NDSISVFSGP ECVLTSTLRR SHGGAICDFS IGGDRLFALH 60
61 NEENVFDVWE TPPPPII
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
