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View Structure Prediction Details

Protein: gi|50925975, gi|...
Organism: Oryza sativa Japonica Group
Length: 753 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50925975, gi|....

Description E-value Query
Range
Subject
Range
gi|116310694, gi... - gi|116310712|emb|CAH67509.1| OSIGBa0092E01.4 [Oryza sativa (indica cultivar-group)], gi|116310694|em...
392.0 [0..1] [753..1]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRAIIRRR KYALEHTNIP VLLRHSSIST FGQEKFGCEI EQSTASQNSR ESNHEKAQYI  60
   61 LRKQGLLGLS ILCHPTRGAS LASYESKPQT FGFPLGARYF LQSVRPTSST AGQPKVGILD 120
  121 ERSENQNQNQ GKKEASPEEC DQAVEGLSTA KAKAKAKLVQ EVQKSDQSII HK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [173-364]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FWAILLGIGP ALRAVASMSR ADWAAKLKHW KDEFVSTLQH YWLGTKLLWA DVRISSRLLV  60
   61 KLAGGKSLTR RERQQLTRTT ADLFRLVPFA VFIIVPFMEF LLPVFLKMFP NMLPSTFQDK 120
  121 MKEEEALKRK LKARMEYARF LQDTAKEMAK EVQTSRSGEM KQTAEDLDEF LNKVRKGGHV 180
  181 SNEEILSFAK LF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 35.124939
Match: PF07766.4
Description: No description for PF07766.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [365-753]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDELTLDNMN RARLVNMCKY MGIQPFGTDH YLTFMLRKKL QEIKNDDKMI QAEGVESLSE  60
   61 EELRQACRER GHLGLLSTEE MQNQLRDWLD LSLNHSVPSS LLILSRAFTM SGKMKPEEAV 120
  121 VATLSSLPDE VVDTVGTVLP SEDSVSDRKR KLEFLEMQEE LIKEEEKRQE KEDKAKLEVP 180
  181 KATEEDVALK EMTEPTAREE KELKKAKVEH DRKEQLCDIS QALAVLASAS SVAKERQEFL 240
  241 NLVNKEIELY NTMLEKEGTK GEEEARRAYK AAREESDHAA EIAAGEKVSS ALIERVDAML 300
  301 QKLEKEIDDV DARIGNRWQL LDSDRDGKVT PDEVAAAANY LKDTIGKEGV QELISNLSKD 360
  361 KDGKILVEDI VKLASQTGES NEQEETPRQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.69897
Match: 2dfsA
Description: No description for 2dfsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle