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View Structure Prediction Details

Protein: gi|113564435, gi...
Organism: Oryza sativa Japonica Group
Length: 341 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113564435, gi....

Description E-value Query
Range
Subject
Range
gi|116310791, gi... - gi|218194897|gb|EEC77324.1| hypothetical protein OsI_15996 [Oryza sativa Indica Group], gi|116310791...
600.0 [0..1] [341..1]

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Predicted Domain #1
Region A:
Residues: [1-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSQGFGPGG SPKSFRYPRA DFDLESGIAR KGLRKPKNHD APGLLTSTLM KIRYFYEAHP  60
   61 VAVAFILLSF GLSVLILLSV YETRFRMMRG SSGEVGEYPL PELRNLVMVA GHSIYTSESC 120
  121 GKIDREDSWF LEPYQKHPGQ AATFLAHIKE GVGIAARDEK ALLLFSGGET RKDAGPRSEA 180
  181 QSYWTIADSK GWFGNDESVR RRALTEEHAR DSFENLLFSV CRFRELTGSY PQNITVVSYD 240
  241 FKEERFAQLH RSALGFPEGR FFFLGTPATL TARESAVKGE AAVRSQFQED PYGCLGSLHM 300
  301 KRLKRDPFHR AIPYPNGCPE LKGLFSYCGL VPYPGQLPWT Q

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle