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View Structure Prediction Details

Protein: gi|50923675, gi|...
Organism: Oryza sativa Japonica Group
Length: 347 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50923675, gi|....

Description E-value Query
Range
Subject
Range
EIF3H_ARATH - Eukaryotic translation initiation factor 3 subunit H OS=Arabidopsis thaliana GN=TIF3H1 PE=1 SV=2
285.0 [0..25] [347..15]

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Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANPAAAAGP SGGARSFLQA VSTVTEEAPS PLRVVQMEGL AVLKIIKHCE EFAPALVTGQ  60
   61 LLGLDVGSVL EVTNCFPFPM REDDEEADAD GANYQLEMMR CLREVNVDNN TVGWYQSCLL 120
  121 GSFQTVELIE TFMNYQENIR RCVCIVYDPS RSNQGVLALK ALKLTDSFMD LYRNNGLTGE 180
  181 KLREKKLSWV DIFEEIPIKV SNSALVSAFM TELEPESPVS QCDFDRLKLS 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.39794
Match: 2o95A
Description: No description for 2o95A was found.

Predicted Domain #2
Region A:
Residues: [231-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TAPFMERNLE FLIGCMDDLS SEQNKFQYYY RNVSRQQSQQ QAWLQKRRQE NMARKAAGEE  60
   61 PLPEEDPSNP IFKPIPEPSR LEGYLVTNQI SSYCNHINGV AGQNFNRLYL MKALQED

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle