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View Structure Prediction Details

Protein: SUS1_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 816 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for SUS1_ORYSJ.

Predicted Domain #1
Region A:
Residues: [1-175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEAAGDRVL SRLHSVRERI GDSLSAHPNE LVAVFTRLVN LGKGMLQAHQ IIAEYNNAIS  60
   61 EADREKLKDG AFEDVLRSAQ EGIVISPWVA LAIRPRPGVW EYVRVNVSEL AVELLTVPEY 120
  121 LQFKEQLVEE GTNNNFVLEL DFEPFNASFP RPSLSKSIGN GVQFLNRHLS SKLFH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [176-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DKESMYPLLN FLRAHNYKGM TMMLNDRIRS LSALQGALRK AEEHLSGLSA DTPYSEFHHR  60
   61 FQELGLEKGW GDCAKRSQET IHLLLDLLEA PDPSTLEKFL GT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [278-816]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPMVFNVVIM SPHGYFAQAN VLGYPDTGGQ VVYILDQVRA MENEMLLRIK QQGLNITPRI  60
   61 LIVTRLLPDA TGTTCGQRLE KVLGTEHTHI LRVPFRTENG IVRKWISRFE VWPYLETFTD 120
  121 DVAHEIAGEL QANPDLIIGN YSDGNLVACL LAHKMGVTHC TIAHALEKTK YPNSDLYWKK 180
  181 FEDHYHFSCQ FTTDLIAMNH ADFIITSTFQ EIAGNKDTVG QYESHMAFTM PGLYRVVHGI 240
  241 DVFDPKFNIV SPGADMSIYF PYSESRKRLT SLHPEIEELL YSEVDNNEHK FMLKDRNKPI 300
  301 IFSMARLDRV KNLTGLVELY GRNPRLQELV NLVVVCGDHG NPSKDKEEQA EFKKMFDLIE 360
  361 QYNLNGHIRW ISAQMNRVRN GELYRYICDT KGAFVQPAFY EAFGLTVVES MTCGLPTFAT 420
  421 AYGGPAEIIV NGVSGFHIDP YQGDKASALL VEFFEKCQED PSHWTKISQG GLQRIEEKYT 480
  481 WKLYSERLMT LTGVYGFWKY VSNLERRETR RYLEMLYALK YRTMASTVPL AVEGEPSNK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.522879
Match: 2r60A
Description: No description for 2r60A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle