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View Structure Prediction Details

Protein: gi|125586396, gi...
Organism: Oryza sativa Japonica Group
Length: 114 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125586396, gi....

Description E-value Query
Range
Subject
Range
gi|125528046 - gi|125528046|gb|EAY76160.1| hypothetical protein OsI_04093 [Oryza sativa Indica Group]
gi|55296316, gi|... - gi|55297693|dbj|BAD68283.1| hypothetical protein [Oryza sativa Japonica Group], gi|55296316|dbj|BAD6...
119.0 [0..5] [110..3]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARQQLLGLF LVLAIMVAVV WGDPSGGCDQ DRQDMIRECK KYEGWPAEPK IEPSEACCAV  60
   61 WQRANIPCLC AGVTKEKEKV WCMEKVVYVA KFCKKPFQPG YQCGSYTVPS SLGQ

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.19
Match: 1afhA
Description: LIPID TRANSFER PROTEIN FROM MAIZE SEEDLINGS, NMR, 15 STRUCTURES
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle