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View Structure Prediction Details

Protein: BT2_ARATH
Organism: Arabidopsis thaliana
Length: 364 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BT2_ARATH.

Description E-value Query
Range
Subject
Range
gi|4678352, gi|7... - pir||T06706 hypothetical protein T29H11.120 - Arabidopsis thaliana, gi|4678352|emb|CAB41162.1| putat...
228.0 [0..1] [364..1]

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Predicted Domain #1
Region A:
Residues: [1-137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAVLVAMSV PATTEDDGFS LITDKLSYNL TPTSDVEIVT SDNRRIPAHS GVLASASPVL  60
   61 MNIMKKPMRR YRGCGSKRVI KILGVPCDAV SVFIKFLYSS SLTEDEMERY GIHLLALSHV 120
  121 YMVTQLKQRC SKGVVQR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.0
Match: 2nn2A
Description: No description for 2nn2A was found.

Predicted Domain #2
Region A:
Residues: [138-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LTTENVVDVL QLARLCDAPD VCLRSMRLIH SQFKTVEQTE GWKFIQEHDP FLELDILQFI  60
   61 DDAESRKKRR RRHRKEQDLY MQLSEAMECI EHICTQGCTL VGPSNVVDNN K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.09691
Match: 2eqxA
Description: No description for 2eqxA was found.

Predicted Domain #3
Region A:
Residues: [249-364]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KSMTAEKSEP CKAFSTCYGL QLLIRHFAVC KRRNNDKGCL RCKRMLQLFR LHSLICDQPD  60
   61 SCRVPLCRQF RKRGEQDKKM GEDTKWKLLV TRVVSAKAMT SLCQSKKNKC EQAQGV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.69897
Match: 1f81A
Description: CREB-binding transcriptional adaptor protein CBP (p300)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle