YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|7437824
Organism:	Synechocystis sp.
Length:	653 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7437824.

Description	E-value	Query Range	Subject Range
ACSA_THEEB - Acetyl-coenzyme A synthetase OS=Thermosynechococcus elongatus (strain BP-1) GN=acsA PE=3 SV=1 ACSA_SYNEL - Acetyl-coenzyme A synthetase OS=Synechococcus elongatus GN=acsA PE=3 SV=1	639.0	[0..4]	[653..5]
gi\|75907429, gi\|... - gi\|75907429\|ref\|YP_321725.1\| acetyl-CoA synthetase [Anabaena variabilis ATCC 29413], gi\|75701154\|gb\|...	638.0	[0..1]	[653..1]
gi\|48892708, gi\|... - gi\|71675139\|ref\|ZP_00672885.1\| AMP-dependent synthetase and ligase [Trichodesmium erythraeum IMS101]...	634.0	[0..1]	[653..1]
gi\|186686297, gi... - gi\|23126660\|ref\|ZP_00108549.1\| COG0365: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Nostoc...	633.0	[0..1]	[653..1]
gi\|81169042, gi\|... - gi\|81300161\|ref\|YP_400369.1\| acetyl-CoA synthetase [Synechococcus elongatus PCC 7942], gi\|81169042\|g... gi\|56685171, gi\|... - gi\|56750212\|ref\|YP_170913.1\| acetyl-CoA synthetase [Synechococcus elongatus PCC 6301], gi\|56685171\|d...	630.0	[0..1]	[653..1]
gi\|53736204, gi\|... - gi\|67921295\|ref\|ZP_00514814.1\| AMP-dependent synthetase and ligase [Crocosphaera watsonii WH 8501], ...	625.0	[0..3]	[652..8]
gi\|33240491, gi\|... - gi\|33240491\|ref\|NP_875433.1\| Acyl-coenzyme A synthetase [Prochlorococcus marinus subsp. marinus str....	619.0	[0..2]	[651..6]
gi\|84517905, gi\|... - gi\|84517905\|ref\|ZP_01005254.1\| acetyl-coenzyme A synthetase [Prochlorococcus marinus str. MIT 9211],...	615.0	[0..2]	[651..6]
ACSA_THET8 - Acetyl-coenzyme A synthetase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=acsA PE=...	614.0	[0..3]	[653..2]
gi\|88787398, gi\|... - gi\|88808410\|ref\|ZP_01123920.1\| Acetate--CoA ligase [Synechococcus sp. WH 7805], gi\|88787398\|gb\|EAR18...	614.0	[0..1]	[652..1]

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Predicted Domain #1

Region A:
Residues: [1-653]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDTIESILQ EERLFDPPTE FSERAYVRSG REYEQLYSRA ASNPEKFWGE LAEQELHWFK  60
   61 KWDQVLDWQP PFAKWFVGGQ LNISHNCLDR HLTTWRRNKA AIIWEGEPGD SRIITYAQLH 120
  121 REVCQFANAL KSLGVQKGDR VAIYLPMIPE AAITMLACSR IGAPHSVVFG GFSAEALRDR 180
  181 LVDAEAKLVI TADGGFRKDK AIALKQEVDK ALEHGAPSVE NVIVVQRTKA DVTMTAGRDH 240
  241 WWHELQPQQS AHCPAEPIDS EDMLFILYTS GSTGKPKGVV HTTGGYNLYT HMTTKWIFDL 300
  301 KDTDVYWCTA DVGWITGHSY IVYGPLSNGA TTVMYEGVPR PSNPGCFWDV IERYGVNIFY 360
  361 TAPTAIRAFI RMGEAVPNAR DLSSLRLLGT VGEPINPEAW MWYHRVIGGG KCPIVDTWWQ 420
  421 TETGGIMLTP LPGAIPTKPG SCTKPFPGIV AEIVDLDGNP VESDQGGFLV IKQPWPSMIR 480
  481 DVYGDTDRFR HTYWEHIQPK EGQYLYFAGD GARRDKDGYF WVMGRVDDVI NVSGHRLGTM 540
  541 EIESALVSHP LVAEAAVVGR PDELTGEAIF AFVSLEGNAE PSEELKKDLV KHVTEEIGAI 600
  601 ARPAEIRFTD VLPKTRSGKI MRRLLRSLAS GQEISGDTST LEDRTVLDKL REG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	160.0
Match:	2p2fA
Description:	No description for 2p2fA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits