YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|1653293, gi\|1...
Organism:	Synechocystis sp. PCC 6803
Length:	419 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|1653293, gi|1....

Description	E-value	Query Range	Subject Range
ARGJ_SYNY3 - Arginine biosynthesis bifunctional protein ArgJ OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 /... ARGJ_SYNY3 - Arginine biosynthesis bifunctional protein ArgJ OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=a...	616.0	[0..7]	[419..1]
gi\|45523784, gi\|... - gi\|67925018\|ref\|ZP_00518401.1\| Arginine biosynthesis protein ArgJ [Crocosphaera watsonii WH 8501], g...	587.0	[0..9]	[419..5]
gi\|25318976 - pir\|\|AC2065 glutamate N-acetyltransferase [imported] - Nostoc sp. (strain PCC 7120) ARGJ1_NOSS1 - Arginine biosynthesis bifunctional protein ArgJ 1 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=arg...	581.0	[0..7]	[419..1]
ARGJ_BACCZ - Arginine biosynthesis bifunctional protein ArgJ OS=Bacillus cereus (strain ZK / E33L) GN=argJ PE=3 S...	581.0	[0..7]	[419..6]
ARGJ_GEOKA - Arginine biosynthesis bifunctional protein ArgJ OS=Geobacillus kaustophilus GN=argJ PE=3 SV=1 ARGJ_GEOKA - Arginine biosynthesis bifunctional protein ArgJ OS=Geobacillus kaustophilus (strain HTA426) GN=argJ ...	578.0	[0..12]	[419..13]
gi\|228811839, gi... - gi\|228947852\|ref\|ZP_04110139.1\| Arginine biosynthesis bifunctional protein argJ beta chain [Bacillus... gi\|65321523 - gi\|65321523\|ref\|ZP_00394482.1\| COG1364: N-acetylglutamate synthase (N-acetylornithine aminotransfera... gi\|49187037, gi\|... - gi\|49187037\|ref\|YP_030289.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase pro...	576.0	[0..7]	[419..6]
gi\|45506053, gi\|... - gi\|75909325\|ref\|YP_323621.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase pro...	576.0	[0..7]	[419..1]
ARGJ_BACAN - Arginine biosynthesis bifunctional protein ArgJ OS=Bacillus anthracis GN=argJ PE=3 SV=1 gi\|21402186 - ref\|NP_658171.1\| ArgJ, ArgJ family [Bacillus anthracis str. A2012] gi\|218905271, gi... - gi\|218905271\|ref\|YP_002453105.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillu... gi\|190565859, gi... - gi\|190565859\|ref\|ZP_03018778.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillus... gi\|177652706, gi... - gi\|177652706\|ref\|ZP_02935122.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillus... gi\|47504798, gi\|... - gi\|47529650\|ref\|YP_020999.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase pro... gi\|227006718, gi... - gi\|227816910\|ref\|YP_002816919.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillu... gi\|30264209, gi\|... - gi\|30264209\|ref\|NP_846586.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase pro... gi\|254683898 - gi\|254683898\|ref\|ZP_05147758.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase ... gi\|229602352, gi... - gi\|229602352\|ref\|YP_002868432.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillu... gi\|254736245 - gi\|254736245\|ref\|ZP_05193951.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase ... gi\|254721733 - gi\|254721733\|ref\|ZP_05183522.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase ... gi\|254758224 - gi\|254758224\|ref\|ZP_05210251.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase ... gi\|170129182, gi... - gi\|170705642\|ref\|ZP_02896105.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillus... gi\|254754084 - gi\|254754084\|ref\|ZP_05206119.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase ... gi\|170668752, gi... - gi\|170687135\|ref\|ZP_02878353.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillus... gi\|167512548, gi... - gi\|167639489\|ref\|ZP_02397760.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillus... gi\|164713064, gi... - gi\|165871145\|ref\|ZP_02215795.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillus...	576.0	[0..7]	[419..5]
ARGJ_BACHK - Arginine biosynthesis bifunctional protein ArgJ OS=Bacillus thuringiensis subsp. konkukian (strain 9... ARGJ_BACHK - Arginine biosynthesis bifunctional protein ArgJ OS=Bacillus thuringiensis subsp. konkukian GN=argJ P...	575.0	[0..7]	[419..6]
ARGJ_BACC1 - Arginine biosynthesis bifunctional protein ArgJ OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=...	575.0	[0..7]	[419..5]

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Predicted Domain #1

Region A:
Residues: [1-419]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWQAFPMADW QVIEGNITAP KGFKAAGITA GLKPSGSPDL SLIYSETEAI AAGVFTTSQV  60
   61 RAACVDYCRQ RLQAKASARA ILVNSGQANA GTGKQGWDDA VESAQLLAQG LNISPESILL 120
  121 ASTGVIGQRI KMEQLRQGIT PLIQSLAPNG GDKAARAIMT TDLVPKTIAL ETEIDGRPVR 180
  181 MGGIAKGSGM IHPNMATMLA FVTCDAAVST ALWQQMLSRA TQKTFNQVTV DGDTSTNDSL 240
  241 FALANGESRT AAITEMGPNA EKLEAMLTAV CQHLAKAIAR DGEGATCLME IQVTGAPDDQ 300
  301 SARAVARTIA GSSLVKSAVF GRDPNWGRIA GAAGRAGVKF DQNNLLIKLG NYVLMDQGQP 360
  361 LEFDRPGASN YLKQAASGAY LEQDTVLIQV DLGTGSGQGT AWGCDLSYDY VRINADYTT

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	127.0
Match:	1vz6A
Description:	Ornithine Acetyltransferase (ORF6 Gene Product - Clavulanic Acid Biosynthesis) from Streptomyces clavuligerus
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
glutamate N-acetyltransferase activity	7.31583566409397	bayes_pls_golite062009
acetyl-CoA:L-glutamate N-acetyltransferase activity	5.4926416554153	bayes_pls_golite062009
N-acetyltransferase activity	4.96696522207886	bayes_pls_golite062009
N-acyltransferase activity	4.73607169922009	bayes_pls_golite062009
transferase activity, transferring acyl groups	3.68873019774933	bayes_pls_golite062009
acetyltransferase activity	2.5583016526898	bayes_pls_golite062009
catalytic activity	1.79436687732784	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	1.59037053975861	bayes_pls_golite062009
acyltransferase activity	1.58751303684177	bayes_pls_golite062009
transferase activity	1.00050620701588	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: