YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|7448944
Organism:	Synechocystis sp.
Length:	109 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7448944.

Description	E-value	Query Range	Subject Range
gi\|86605021 - gi\|86605021\|ref\|YP_473784.1\| MoaD family protein [Cyanobacteria bacterium Yellowstone A-Prime] gi\|86605021, gi\|... - gi\|86605021\|ref\|YP_473784.1\| MoaD family protein [Synechococcus sp. JA-3-3Ab], gi\|86553563\|gb\|ABC985...	114.0	[0..19]	[109..1]
gi\|86558784, gi\|... - gi\|86610242\|ref\|YP_479004.1\| MoaD family protein [Synechococcus sp. JA-2-3B'a(2-13)], gi\|86558784\|gb... gi\|86610242 - gi\|86610242\|ref\|YP_479004.1\| MoaD family protein [Cyanobacteria bacterium Yellowstone B-Prime]	113.0	[0..19]	[109..1]
gi\|37521630, gi\|... - gi\|37521630\|ref\|NP_925007.1\| hypothetical protein gsl2061 [Gloeobacter violaceus PCC 7421], gi\|35212...	110.0	[0..19]	[109..1]
gi\|22294706, gi\|... - gi\|22298526\|ref\|NP_681773.1\| hypothetical protein tsr0983 [Thermosynechococcus elongatus BP-1], gi\|2...	110.0	[0..19]	[109..1]
gi\|71670503, gi\|... - gi\|71676258\|ref\|ZP_00674000.1\| MoaD, archaeal [Trichodesmium erythraeum IMS101], gi\|71670503\|gb\|EAO2...	107.0	[0..19]	[109..1]
gi\|56687280, gi\|... - gi\|56752321\|ref\|YP_173022.1\| hypothetical protein syc2312_d [Synechococcus elongatus PCC 6301], gi\|5... gi\|81169471, gi\|... - gi\|81300590\|ref\|YP_400798.1\| hypothetical protein Synpcc7942_1781 [Synechococcus elongatus PCC 7942]...	106.0	[0..19]	[109..1]
gi\|114777469, gi... - gi\|114777469\|ref\|ZP_01452466.1\| hypothetical protein SPV1_14254 [Mariprofundus ferrooxydans PV-1], g...	105.0	[0..19]	[109..1]
gi\|45525744, gi\|... - gi\|67922943\|ref\|ZP_00516439.1\| ThiamineS [Crocosphaera watsonii WH 8501], gi\|67855226\|gb\|EAM50489.1\|...	105.0	[0..19]	[109..1]
gi\|186681262, gi... - gi\|23129177\|ref\|ZP_00111010.1\| COG1977: Molybdopterin converting factor, small subunit [Nostoc punct...	105.0	[0..19]	[109..1]
gi\|117928895, gi... - gi\|88932029\|ref\|ZP_01137722.1\| conserved hypothetical protein [Acidothermus cellulolyticus 11B], gi\|...	105.0	[0..19]	[109..1]

Back

Predicted Domain #1

Region A:
Residues: [1-109]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSPALPRLS NPLFFANIMT VKVLIPTPLQ KFTSGQATID CEAANVGQLI EALEANCPGI  60
   61 KARLCDEEGK PRRFLNFYVN EEDIRFLEGT DTALSAGDEV SIVPAVAGG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	20.30103
Match:	2g1eA
Description:	No description for 2g1eA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits