YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|7434577
Organism:	Synechocystis sp.
Length:	375 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7434577.

Description	E-value	Query Range	Subject Range
PROB_NOSS1 - Glutamate 5-kinase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=proB PE=3 SV=2	323.0	[0..8]	[372..12]
PROB_THETN - Glutamate 5-kinase OS=Thermoanaerobacter tengcongensis GN=proB PE=3 SV=1 gi\|254479125, gi... - gi\|254479125\|ref\|ZP_05092476.1\| glutamate 5-kinase [Carboxydibrachium pacificum DSM 12653], gi\|22348... PROB_CALS4 - Glutamate 5-kinase OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 110...	321.0	[0..9]	[374..2]
PROB_ANAVT - Glutamate 5-kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=proB PE=3 SV=1	321.0	[0..8]	[372..3]
gi\|67922969, gi\|... - gi\|67922969\|ref\|ZP_00516464.1\| Glutamate 5-kinase, ProB-related [Crocosphaera watsonii WH 8501], gi\|...	318.0	[0..1]	[372..1]
PROB_SYNE7 - Glutamate 5-kinase OS=Synechococcus elongatus (strain PCC 7942) GN=proB PE=3 SV=1	317.0	[0..9]	[372..4]
PROB_SYNP6 - Glutamate 5-kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=proB PE=3 SV...	317.0	[0..9]	[372..7]
PROB_GEOMG - Glutamate 5-kinase OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=proB PE=3 ...	313.0	[0..4]	[373..6]
PROB_THET2 - Glutamate 5-kinase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=proB PE=3 SV=2 PROB_THET8 - Glutamate 5-kinase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=proB PE=3 SV=1	312.0	[0..1]	[374..1]
gi\|241902816, gi... - gi\|241902816\|ref\|ZP_04787547.1\| glutamate 5-kinase [Thermoanaerobacter brockii subsp. finnii Ako-1],... gi\|242257172, gi... - gi\|242257172\|ref\|ZP_04802045.1\| glutamate 5-kinase [Thermoanaerobacter sp. X513], gi\|242231277\|gb\|EE... PROB_THEPX - Glutamate 5-kinase OS=Thermoanaerobacter sp. (strain X514) GN=proB PE=3 SV=1 PROB_THEP3 - Glutamate 5-kinase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=proB PE=3 SV=...	312.0	[0..9]	[374..2]
gi\|71674495, gi\|... - gi\|71674495\|ref\|ZP_00672242.1\| Glutamate 5-kinase, ProB-related [Trichodesmium erythraeum IMS101], g...	311.0	[0..9]	[372..3]

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Predicted Domain #1

Region A:
Residues: [1-375]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMAMQPQTL VIKIGTSSLA RPETGQLALS TIAALVETVC KLIGQGHRVV LVSSGAIGVG  60
   61 CSRLGLTERP KKMALKQAIA AVGQGRLMRT YDDLFSSLRQ PIAQILLTRR ELIERTAYVN 120
  121 AYNTFQALFE LGVIAIVNEN DTVAIDELKF GDNDTLSALV ASLVEADWLF LLTDVDRLYS 180
  181 SDPRLDPDAY PIPLVKAAEL AQLQVRTDST GSAWGTGGMA TKITAARIAT GSGVRTVITH 240
  241 GQKPEQILAI LQGANLGTQF EAQPRSDNAR KRWIAYGLVP TGKIFIDAGA VQALKARGKS 300
  301 LLAIGVVALE GEFSATDAVI ICDPQGQELG RGLVNYNCNE LEKIKGLHSE AIAAVLGYVG 360
  361 PDTVIHRDNL VLQEN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	81.0
Match:	2j5tA
Description:	No description for 2j5tA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits