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View Structure Prediction Details

Protein: gi|25285726
Organism: Caulobacter vibrioides
Length: 412 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25285726.

Description E-value Query
Range
Subject
Range
gi|51997118 - gi|51997118|emb|CAH04397.1| ferredoxin reductase [Mycobacterium sp. HXN-1500]
319.0 [0..11] [402..10]

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Predicted Domain #1
Region A:
Residues: [1-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAEVNQNAC VVIVGAGHAG GSVAAFLRQY GHEGRIVLIG DEPLLPYQRP PLSKAWLKGE  60
   61 ADADSLSLKP AGWYADNNVM LRLGGVAERI NRSDKTVALA SGEVIPYDFL VLATGARARE 120
  121 LPIPGADLAG VLALRTAADA ELLKNALGPD KRLAVVGGGY VGLEAAASAR ALGSHAMVIE 180
  181 RESRVLARVA CETLSHFFQD YHGKHGVAFE LNAGVAAFEG HDGHVTGVRF NDGRVVACDV 240
  241 ALVGVGAVPN DELAKDAGLS TANGVVVDLE ARTDDPSIFA IGDVTHRPLP LYDRQFRLES 300
  301 VPNALEQAKQ AASAILGRPG PAPETPWFWS DQYDLKLQIA GLPFDADRQV VRGDVAAAKF 360
  361 AVFHLKGDLV QAVEAVNAPP EFMAGKQLIA KRTPVDANKL ADPSVSMKEV AA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.69897
Match: 1q1rA
Description: Crystal Structure of Putidaredoxin Reductase from Pseudomonas putida
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.72883626464817 bayes_pls_golite062009
oxidoreductase activity 1.82811823516707 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 0.528358134873026 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 0.513206464007948 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor 0.181113997070302 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle