YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|16127286, gi\|...
Organism:	Caulobacter crescentus CB15
Length:	137 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16127286, gi|....

Description	E-value	Query Range	Subject Range
gi\|77967364, gi\|... - gi\|78066619\|ref\|YP_369388.1\| globin-like protein [Burkholderia sp. 383], gi\|77967364\|gb\|ABB08744.1\| ...	183.0	[0..1]	[130..1]
gi\|115351838, gi... - gi\|115351838\|ref\|YP_773677.1\| globin [Burkholderia ambifaria AMMD], gi\|115281826\|gb\|ABI87343.1\| glob...	183.0	[0..1]	[130..1]
gi\|27354500, gi\|... - gi\|27381333\|ref\|NP_772862.1\| Sec-independent protein translocase protein [Bradyrhizobium japonicum U...	181.0	[0..7]	[137..20]
gi\|91783440, gi\|... - gi\|91783440\|ref\|YP_558646.1\| hypothetical protein Bxe_A2376 [Burkholderia xenovorans LB400], gi\|9168...	181.0	[0..5]	[130..6]
gi\|46323547, gi\|... - gi\|67543766\|ref\|ZP_00421697.1\| conserved hypothetical protein [Burkholderia vietnamiensis G4], gi\|67...	180.0	[0..2]	[130..6]
gi\|88190528, gi\|... - gi\|88596839\|ref\|ZP_01100075.1\| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni 84... gi\|86149048, gi\|... - gi\|86149048\|ref\|ZP_01067280.1\| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni CF... gi\|145844830, gi... - gi\|148925844\|ref\|ZP_01809531.1\| hypothetical protein Cj8486_0456c [Campylobacter jejuni subsp. jejun... TRHBP_CAMJE - Group 3 truncated hemoglobin ctb OS=Campylobacter jejuni GN=ctb PE=1 SV=1 TRHBP_CAMJE - Group 3 truncated hemoglobin ctb OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700...	179.0	[0..16]	[134..6]
gi\|87304572, gi\|... - gi\|87304572\|ref\|ZP_01086728.1\| sec-independent protein translocase protein tatc [Campylobacter jejun...	179.0	[0..16]	[134..6]
gi\|84362040 - gi\|84362040\|ref\|ZP_00986677.1\| COG2346: Truncated hemoglobins [Burkholderia dolosa AUO158]	178.0	[0..5]	[130..9]
gi\|84354865, gi\|... - gi\|84354865\|ref\|ZP_00979762.1\| COG2346: Truncated hemoglobins [Burkholderia cenocepacia PC184], gi\|2...	178.0	[0..1]	[130..1]
gi\|107028972, gi... - gi\|107028972\|ref\|YP_626067.1\| globin [Burkholderia cenocepacia AU 1054], gi\|105898136\|gb\|ABF81094.1\|... gi\|116689870, gi... - gi\|116689870\|ref\|YP_835493.1\| globin [Burkholderia cenocepacia HI2424], gi\|116647959\|gb\|ABK08600.1\| ...	178.0	[0..1]	[130..1]

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Predicted Domain #1

Region A:
Residues: [1-137]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSPRSQAR ADAAPFTDEE IDRLVETFYA RIRQHHRLGP IFEAAIGPDG WPEHLAKLKD  60
   61 FWSSVLNTSG RYKGQPVAAH QGVEGVTEGL FTPWLGLFHM TCAELFDAPR AAIIGQKAER 120
  121 IAATLKLGLF HRPGAVA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	45.69897
Match:	2ig3A
Description:	No description for 2ig3A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits