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View Structure Prediction Details

Protein: gi|25400178
Organism: Caulobacter vibrioides
Length: 337 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25400178.

Description E-value Query
Range
Subject
Range
gi|71155563, gi|... - gi|71368737|ref|ZP_00659224.1| Arsenical-resistance protein ACR3 [Nocardioides sp. JS614], gi|711555...
236.0 [0..5] [330..230]

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Predicted Domain #1
Region A:
Residues: [1-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGGTRILSM GFKSLLDKLK IEPYVIALFG MVVLASVLPV RGAAAEGLSV IVKLAIALLF  60
   61 FLHGAKLSRE AVVAGVTHWR LHLTILAFTF VMFPVLGLVA SKLGVLSSTL AAGMLFLCCL 120
  121 PSTVQSSIAF TSIARGNVAA AVCAASASNL FGIFITPVLV SVLMHTQGGA AGGWESIQDI 180
  181 IVQLLLPFIL GQLARPLVAK WVEKHKQLVG YVDRGSILLV VYAAFSEAVV GGIWSK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 3.823909
Match: PF01758.7
Description: No description for PF01758.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [237-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSALEMVVLL VACCILLAIV LAATTYGARA LGFSKEDEIT IMFCGSKKSM ATGVPMAGIL  60
   61 FPGPTAGVIV LPLMIFHQIQ LMACSVIAQH YAKRPSEIVE A

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle