YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|15900569, gi\|...
Organism:	Streptococcus pneumoniae TIGR4
Length:	320 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15900569, gi|....

Description	E-value	Query Range	Subject Range
gi\|182628928, gi... - gi\|182683594\|ref\|YP_001835341.1\| glucokinase [Streptococcus pneumoniae CGSP14], gi\|182628928\|gb\|ACB8... gi\|194357009, gi... - gi\|194397342\|ref\|YP_002037324.1\| glucokinase [Streptococcus pneumoniae G54], gi\|194357009\|gb\|ACF5545... gi\|66879641, gi\|... - gi\|66879641\|ref\|ZP_00404658.1\| COG1940: Transcriptional regulator/sugar kinase [Streptococcus pneumo... gi\|25511505 - pir\|\|H97944 glucokinase (EC 2.7.1.2) [imported] - Streptococcus pneumoniae (strain R6) gi\|15902628, gi\|... - gi\|15902628\|ref\|NP_358178.1\| glucokinase [Streptococcus pneumoniae R6], gi\|15458164\|gb\|AAK99388.1\| G...	271.0	[0..1]	[320..6]
gi\|172043847, gi... - gi\|172043847\|gb\|EDT51893.1\| glucokinase (Glucose kinase) [Streptococcus pneumoniae CDC1873-00], gi\|1... gi\|183569871, gi... - gi\|183569871\|gb\|EDT90399.1\| glucokinase (Glucose kinase) [Streptococcus pneumoniae CDC1087-00], gi\|1... gi\|221231484, gi... - gi\|221231484\|ref\|YP_002510636.1\| glucokinase [Streptococcus pneumoniae ATCC 700669], gi\|220673944\|em... gi\|116077604, gi... - gi\|116517028\|ref\|YP_816079.1\| glucokinase [Streptococcus pneumoniae D39], gi\|116077604\|gb\|ABJ55324.1... gi\|225723760, gi... - gi\|225854194\|ref\|YP_002735706.1\| glucokinase (Glucose kinase) [Streptococcus pneumoniae JJA], gi\|225... gi\|147922449, gi... - gi\|148985251\|ref\|ZP_01818474.1\| glucokinase [Streptococcus pneumoniae SP3-BS71], gi\|147922449\|gb\|EDK... gi\|237650311 - gi\|237650311\|ref\|ZP_04524563.1\| glucokinase [Streptococcus pneumoniae CCRI 1974] gi\|147925537, gi... - gi\|148989040\|ref\|ZP_01820440.1\| 50S ribosomal protein L1 [Streptococcus pneumoniae SP6-BS73], gi\|147... gi\|237821972 - gi\|237821972\|ref\|ZP_04597817.1\| glucokinase [Streptococcus pneumoniae CCRI 1974M2] gi\|147759676, gi... - gi\|149002361\|ref\|ZP_01827303.1\| 50S ribosomal protein L1 [Streptococcus pneumoniae SP14-BS69], gi\|14... gi\|147762725, gi... - gi\|149005785\|ref\|ZP_01829524.1\| 50S ribosomal protein L1 [Streptococcus pneumoniae SP18-BS74], gi\|14... gi\|149010710, gi... - gi\|149010710\|ref\|ZP_01832081.1\| glucokinase [Streptococcus pneumoniae SP19-BS75], gi\|147765191\|gb\|ED...	266.0	[0..2]	[320..1]
gi\|15674005, gi\|... - gi\|15674005\|ref\|NP_268180.1\| glucokinase [Lactococcus lactis subsp. lactis Il1403], gi\|12725071\|gb\|A... gi\|25298212 - pir\|\|G86877 glucokinase (EC 2.7.1.2) [imported] - Lactococcus lactis subsp. lactis (strain IL1403)	263.0	[0..1]	[320..1]
gi\|116108624, gi... - gi\|62462158\|ref\|ZP_00381619.1\| COG1940: Transcriptional regulator/sugar kinase [Lactococcus lactis s...	262.0	[0..1]	[320..1]
gi\|29377260, gi\|... - gi\|29377260\|ref\|NP_816414.1\| glucokinase [Enterococcus faecalis V583], gi\|29344726\|gb\|AAO82484.1\| gl... gi\|227176559, gi... - gi\|227554269\|ref\|ZP_03984316.1\| glucokinase [Enterococcus faecalis HH22], gi\|227176559\|gb\|EEI57531.1...	260.0	[0..2]	[320..1]
gi\|71911070, gi\|... - gi\|71911070\|ref\|YP_282620.1\| glucokinase/xylose repressor [Streptococcus pyogenes MGAS5005], gi\|7185... gi\|94990782, gi\|... - gi\|94990782\|ref\|YP_598882.1\| glucokinase [Streptococcus pyogenes MGAS10270], gi\|94544290\|gb\|ABF34338... gi\|15675428, gi\|... - gi\|15675428\|ref\|NP_269602.1\| glucose kinase [Streptococcus pyogenes M1 GAS], gi\|13622617\|gb\|AAK34323... gi\|56808768 - gi\|56808768\|ref\|ZP_00366485.1\| COG1940: Transcriptional regulator/sugar kinase [Streptococcus pyogen... gi\|71802953, gi\|... - gi\|71903858\|ref\|YP_280661.1\| glucokinase [Streptococcus pyogenes MGAS6180], gi\|71802953\|gb\|AAX72306.... gi\|21904919, gi\|... - gi\|21910716\|ref\|NP_664984.1\| putative glucose kinase [Streptococcus pyogenes MGAS315], gi\|21904919\|g... gi\|209540893, gi... - gi\|209559692\|ref\|YP_002286164.1\| Glucokinase [Streptococcus pyogenes NZ131], gi\|209540893\|gb\|ACI6146... gi\|28895594, gi\|... - gi\|28895594\|ref\|NP_801944.1\| putative glucose kinase [Streptococcus pyogenes SSI-1], gi\|28810843\|dbj...	257.0	[0..2]	[320..1]
gi\|94994761, gi\|... - gi\|94994761\|ref\|YP_602859.1\| Glucokinase [Streptococcus pyogenes MGAS10750], gi\|94548269\|gb\|ABF38315...	257.0	[0..2]	[320..1]
gi\|94992774, gi\|... - gi\|94992774\|ref\|YP_600873.1\| glucokinase [Streptococcus pyogenes MGAS2096], gi\|94546282\|gb\|ABF36329.... gi\|139473450, gi... - gi\|139473450\|ref\|YP_001128166.1\| glucokinase [Streptococcus pyogenes str. Manfredo], gi\|134271697\|em... gi\|94542390, gi\|... - gi\|94988882\|ref\|YP_596983.1\| glucokinase [Streptococcus pyogenes MGAS9429], gi\|94542390\|gb\|ABF32439.... gi\|50914624, gi\|... - gi\|50914624\|ref\|YP_060596.1\| glucokinase [Streptococcus pyogenes MGAS10394], gi\|50903698\|gb\|AAT87413... gi\|19746478, gi\|... - gi\|19748683\|gb\|AAL98113.1\| glucose kinase [Streptococcus pyogenes MGAS8232], gi\|19746478\|ref\|NP_6076...	257.0	[0..2]	[320..1]
gi\|76563574, gi\|... - gi\|76788517\|ref\|YP_329205.1\| glucokinase, putative [Streptococcus agalactiae A909], gi\|76563574\|gb\|A... gi\|77405604, gi\|... - gi\|77405604\|ref\|ZP_00782694.1\| glucokinase [Streptococcus agalactiae H36B], gi\|77175826\|gb\|EAO78605.... gi\|77413563, gi\|... - gi\|77413563\|ref\|ZP_00789751.1\| glucokinase [Streptococcus agalactiae 515], gi\|77160392\|gb\|EAO71515.1... gi\|77411448, gi\|... - gi\|77411448\|ref\|ZP_00787794.1\| glucokinase [Streptococcus agalactiae CJB111], gi\|77162534\|gb\|EAO7349... gi\|77408396, gi\|... - gi\|77408396\|ref\|ZP_00785136.1\| glucokinase [Streptococcus agalactiae COH1], gi\|77172999\|gb\|EAO76128.... gi\|76586915, gi\|... - gi\|76797767\|ref\|ZP_00780034.1\| glucose kinase [Streptococcus agalactiae 18RS21], gi\|76586915\|gb\|EAO6... gi\|23094940, gi\|... - gi\|25010587\|ref\|NP_734982.1\| hypothetical protein gbs0518 [Streptococcus agalactiae NEM316], gi\|2309... gi\|22536650, gi\|... - gi\|22536650\|ref\|NP_687501.1\| glucokinase [Streptococcus agalactiae 2603V/R], gi\|22533489\|gb\|AAM99373...	255.0	[0..2]	[320..1]
gi\|80977153, gi\|... - gi\|81096801\|ref\|ZP_00875131.1\| Glucokinase ROK [Streptococcus suis 89/1591], gi\|80977153\|gb\|EAP40706...	250.0	[0..2]	[320..1]

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Predicted Domain #1

Region A:
Residues: [1-320]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSQKIIGID LGGTSIKFAI LTTAGEIQGK WSIKTNILDE GSHIVDDMIE SIQHRLDLLG  60
   61 LAAADFQGIG MGSPGVVDRD KGTVIGAYNL NWKTLQPIKQ KIEKALGIPF FIDNDANVAA 120
  121 LGERWMGAGD NQPDVVFITL GTGVGGGIVA EGKLLHGVAG AAGELGHITV DFDQPISCTC 180
  181 GKKGCLETVA SATGIVNLTR RYADEYEGDA ALKRLIDNGE EVTAKTVFDL AKEGDDLALI 240
  241 VYRNFSRYLG IACANIGSIL NPSTIVIGGG VSAAGEFLLQ GVQKVYDENS FPQVRTSTKL 300
  301 ALATLGNDAG VIGAASLVLQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	69.69897
Match:	2qm1A
Description:	No description for 2qm1A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits