YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|2960116, gi\|1...
Organism:	Mycobacterium tuberculosis H37Rv
Length:	358 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2960116, gi|1....

Description	E-value	Query Range	Subject Range
gi\|110638532, gi... - gi\|110638532\|ref\|YP_678741.1\| MoxR-like ATPase, regulator [Cytophaga hutchinsonii ATCC 33406], gi\|11... gi\|48856710 - gi\|48856710\|ref\|ZP_00310867.1\| COG0714: MoxR-like ATPases [Cytophaga hutchinsonii]	216.0	[0..39]	[358..7]
gi\|83857082, gi\|... - gi\|83857082\|ref\|ZP_00950610.1\| magnesium chelatase, subunit I, putative ATPase [Croceibacter atlanti...	209.0	[0..19]	[358..1]
gi\|125973569, gi... - gi\|67874366\|ref\|ZP_00504152.1\| Magnesium chelatase, ChlI subunit [Clostridium thermocellum ATCC 2740...	205.0	[0..50]	[357..6]
gi\|32444131, gi\|... - gi\|32472894\|ref\|NP_865888.1\| regulatory protein [Rhodopirellula baltica SH 1], gi\|32444131\|emb\|CAD73...	204.0	[0..6]	[358..22]
gi\|242257865, gi... - gi\|242257865\|ref\|ZP_04802713.1\| ATPase associated with various cellular activities AAA_3 [Thermoanae... gi\|166853188, gi... - gi\|167038948\|ref\|YP_001661933.1\| ATPase [Thermoanaerobacter sp. X514], gi\|166853188\|gb\|ABY91597.1\| A... gi\|255114858, gi... - gi\|255253620\|ref\|ZP_05333192.1\| ATPase associated with various cellular activities AAA_3 [Thermoanae...	204.0	[0..50]	[357..5]
gi\|86133472, gi\|... - gi\|86133472\|ref\|ZP_01052054.1\| ATPase family associated with various cellular activities (AAA) [Pola...	204.0	[0..44]	[358..20]
gi\|90198781, gi\|... - gi\|90201902\|ref\|ZP_01204548.1\| ATPase associated with various cellular activities, AAA_3:ATPase asso...	203.0	[0..46]	[358..8]
gi\|146154403, gi... - gi\|90588984\|ref\|ZP_01244635.1\| ATPase associated with various cellular activities, AAA_3:ATPase asso...	203.0	[0..45]	[358..24]
gi\|20806880 - gi\|20806880\|ref\|NP_622051.1\| MoxR-like ATPase [Thermoanaerobacter tengcongensis MB4] gi\|20806880, gi\|... - gi\|20806880\|ref\|NP_622051.1\| MoxR-like ATPase [Thermoanaerobacter tengcongensis MB4], gi\|20515353\|gb...	203.0	[0..50]	[357..7]

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Predicted Domain #1

Region A:
Residues: [1-358]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQSASNPQA PPTQTPGAEL PGYPPQAGGA PTAAPSGPHP HRAEAESARD ALLALRAEVA  60
   61 KAVVGQDGVI SGLVIALLCR GHVLLEGVPG VAKTLIVRAM SAALQLEFKR VQFTPDLMPG 120
  121 DVTGSLVYDA RTAEFVFRPG PVFTNLLLAD EINRTPPKTQ AALLEAMEER QVSVEGEPKP 180
  181 LPNPFIVAAT QNPIEYEGTY QLPEAQLDRF LLKLNVTLPA RDSEIAILDR HAHGFDPRDL 240
  241 SAINPVAGPA ELAAGREAVR HVLVANEVLG YIVDIVGATR SSPALQLGVS PRGATALLGT 300
  301 ARSWAWLSGR DYVTPDDVKA MARPTLRHRV MLRPEAELEG ATPDGVLDGI LASVPVPR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	46.30103
Match:	2r44A
Description:	No description for 2r44A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits