YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29832346, gi\|...
Organism:	Streptomyces avermitilis MA-4680
Length:	191 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29832346, gi|....

Description	E-value	Query Range	Subject Range
gi\|21220836, gi\|... - gi\|8246809\|emb\|CAB92844.1\| conserved hypothetical protein [Streptomyces coelicolor A3(2)], gi\|212208...	304.0	[0..1]	[191..1]
gi\|113460778, gi... - gi\|23467724\|ref\|ZP_00123303.1\| COG2310: Uncharacterized proteins involved in stress response, homolo...	303.0	[0..1]	[191..1]
gi\|46317936, gi\|... - gi\|78061122\|ref\|YP_371030.1\| stress protein [Burkholderia sp. 383], gi\|77969007\|gb\|ABB10386.1\| stres...	303.0	[0..1]	[190..1]
gi\|99867111 - gi\|99867111\|gb\|ABF67756.1\| TerE [Escherichia coli APEC O1] gi\|157412086 - gi\|157412086\|ref\|YP_001481426.1\| TerE [Escherichia coli APEC O1]	303.0	[0..1]	[191..69]
gi\|76262904 - gi\|76262904\|gb\|ABA41519.1\| tellurium resistance protein [Streptomyces hygroscopicus subsp. jinggange...	302.0	[0..1]	[191..1]
gi\|63254774, gi\|... - gi\|66044067\|ref\|YP_233908.1\| stress protein [Pseudomonas syringae pv. syringae B728a], gi\|63254774\|g...	299.0	[0..1]	[190..1]
gi\|152022973, gi... - gi\|89199975\|ref\|ZP_01178731.1\| stress protein [Bacillus cereus subsp. cytotoxis NVH 391-98], gi\|8915...	298.0	[0..1]	[190..1]
gi\|111225248, gi... - gi\|111225248\|ref\|YP_716042.1\| tellurium resistance protein terE [Frankia alni ACN14a], gi\|111152780\|...	298.0	[0..1]	[191..1]
gi\|86742358, gi\|... - gi\|86742358\|ref\|YP_482758.1\| stress protein [Frankia sp. CcI3], gi\|86569220\|gb\|ABD13029.1\| stress pr...	298.0	[0..1]	[191..1]

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Predicted Domain #1

Region A:
Residues: [1-191]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVSLSKGGN VSLTKEAPGL TAVIVGLGWD VRTTTGTDFD LDASALLTNV EGKVANDQNF  60
   61 VFFNNLKSPD GSVEHTGDNI TGEGEGDDEQ IKVDLATVPA DVDKIVFPVS IYDAENRQQS 120
  121 FGQVRNAFIR VVNQAGGAEI ARYDLSEDAS TETAMVFGEL YRNGPEWKFR AIGQGYASGL 180
  181 RGIAQDFGVN V

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	33.0
Match:	2qngA
Description:	No description for 2qngA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits