YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|55379686, gi|...
Organism: Haloarcula marismortui ATCC 43049
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|55379686, gi|....

Predicted Domain #1
Region A:
Residues: [1-180]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSHQQWSPS ERFRSSSGCS PDAPAWSRFC PPTPPPTIWA ITRSTPSRCR KLRTTPVTGA  60
   61 ASPTPPNSTH STRLPTRWHP AKTSRGPTTT TRRARNCSTC SKARFTSKRP TGSTSSRPTR 120
  121 CLSPNRTART TRTTPPMPTN QSLCLASAHR RPTSRARTTL TRNERSGGSD TLFSHPVTVA 180
  181 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.045757
Match: 2yzqA
Description: No description for 2yzqA was found.

Predicted Domain #2
Region A:
Residues: [181-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PMTSKQAVQQ ELVDSGVTAV LRGIPEEKMV DVATAVHEGG VTALELTADA KRCSDMIAAV  60
   61 DKALDDTDAI IGAGTVMDAA AARNVIEAGA EFVLAPNLNE DVIDVCNREG VLAIPGVMTP 120
  121 TEAADAMEAG ADILKMFPAK TVGPAHIGAL QGPLGDVPIM PTGGVSTDNV DEFFDAGAVA 180
  181 VGAGSALVNY EAIENDDMDG VREQAAAFVD AVEAARE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.522879
Match: 1wa3A
Description: Mechanism of the Class I KDPG aldolase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle