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View Structure Prediction Details

Protein: gi|55229797, gi|...
Organism: Haloarcula marismortui ATCC 43049
Length: 602 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|55229797, gi|....

Predicted Domain #1
Region A:
Residues: [1-319]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTETASSPSS KRGRTVRNTI ERRAIVGLAV GTIGLLLGIF YYPVATVFID SVLVDGRWTG  60
   61 RVFVSILQDP FYFGEPARLL AGEQVGAVIE SVLSPDRRLG VIGFTAYQAA LSTVASVALG 120
  121 LPAAYLLARY EFPGRRTLRS LTILPFVLPS IMVGVGFVAT FGRNGTLNAV LGALGLGQVN 180
  181 LLFTLEAVVI AHAFYNAPLV ARVTTAAWES VDASAVETAR SLGASPFRAF RDVVAPQLYP 240
  241 SVLMGAALTF VFTFSTFPIV LALGGFQLAT VEVFVYRLIR DLEYAEAAAL ALIELGISLG 300
  301 LLYAYLRYEA KHTVRSRGI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.69897
Match: 2r6gG
Description: No description for 2r6gG was found.

Predicted Domain #2
Region A:
Residues: [320-602]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPLPRRQLRP PSLSVRELLP RLGLAVYAVV ALAVFVAPIA SMVLASLSGP EGLTLANYQF  60
   61 LIDRQTTGAS FQVQPWDAVR NSLLFGIASL AVALPMGVVV AVLTTRDYRG RKLVDAVAMA 120
  121 PLAVSGIVVG LGLLRGLVFG VEVGGTRLAV GGGFAIIAAH AVAGYPFVVR TVAPGLEGID 180
  181 HRLVESARAL GAPRARALLD IELPLVWPAV IAGAAFAFAI SIGEFSATIV LASGTNQFTM 240
  241 PIAIERFIGR RLGPATAMGV VLLVVTSASF LLIDRLGGDE VGF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.522879
Match: 2onkC
Description: No description for 2onkC was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle