YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260944, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	189 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260944, gi|....

Description	E-value	Query Range	Subject Range
gi\|10174809, gi\|... - gi\|15614753\|ref\|NP_243056.1\| manganese-containing catalase [Bacillus halodurans C-125], gi\|10174809\|... gi\|25356191 - pir\|\|F83923 manganese-containing catalase BH2190 [imported] - Bacillus halodurans (strain C-125)	2.0E-72	[1..184]	[1..198]
gi\|152974481, gi... - gi\|89200482\|ref\|ZP_01179235.1\| Manganese containing catalase [Bacillus cereus subsp. cytotoxis NVH 3...	2.0E-72	[1..189]	[1..189]
gi\|229171585, gi... - gi\|229171585\|ref\|ZP_04299161.1\| hypothetical protein bcere0006_7070 [Bacillus cereus MM3], gi\|228611... gi\|228623621, gi... - gi\|229159882\|ref\|ZP_04287889.1\| hypothetical protein bcere0009_6830 [Bacillus cereus R309803], gi\|22... gi\|74491967, gi\|... - gi\|75760539\|ref\|ZP_00740574.1\| CotJC protein [Bacillus thuringiensis serovar israelensis ATCC 35646]... gi\|218895849, gi... - gi\|218895849\|ref\|YP_002444260.1\| cotJC protein [Bacillus cereus G9842], gi\|218544690\|gb\|ACK97084.1\| ... gi\|228963903, gi... - gi\|228963903\|ref\|ZP_04125038.1\| hypothetical protein bthur0004_7670 [Bacillus thuringiensis serovar ... gi\|228860071, gi... - gi\|228899481\|ref\|ZP_04063737.1\| hypothetical protein bthur0014_7030 [Bacillus thuringiensis IBL 4222...	2.0E-72	[1..189]	[1..189]
gi\|228588370, gi... - gi\|229195141\|ref\|ZP_04321916.1\| hypothetical protein bcere0001_7160 [Bacillus cereus m1293], gi\|2285... gi\|118476467, gi... - gi\|118476467\|ref\|YP_893618.1\| spore coat-associated protein JC [Bacillus thuringiensis str. Al Hakam... gi\|47564740, gi\|... - gi\|47564740\|ref\|ZP_00235784.1\| CotJC protein [Bacillus cereus G9241], gi\|47558113\|gb\|EAL16437.1\| Cot... gi\|42735889, gi\|... - gi\|42779971\|ref\|NP_977218.1\| cotJC protein [Bacillus cereus ATCC 10987], gi\|42735889\|gb\|AAS39826.1\| ... gi\|206736837, gi... - gi\|206967917\|ref\|ZP_03228873.1\| cotJC protein [Bacillus cereus AH1134], gi\|206736837\|gb\|EDZ53984.1\| ... gi\|196022469, gi... - gi\|196046757\|ref\|ZP_03113980.1\| cotJC protein [Bacillus cereus 03BB108], gi\|196022469\|gb\|EDX61153.1\|... gi\|228906554, gi... - gi\|228906554\|ref\|ZP_04070430.1\| hypothetical protein bthur0013_7310 [Bacillus thuringiensis IBL 200]... gi\|225788560, gi... - gi\|225862779\|ref\|YP_002748157.1\| cotJC protein [Bacillus cereus 03BB102], gi\|225788560\|gb\|ACO28777.1... gi\|228693485, gi... - gi\|229089860\|ref\|ZP_04221115.1\| hypothetical protein bcere0021_6980 [Bacillus cereus Rock3-42], gi\|2... gi\|228732721, gi... - gi\|229028600\|ref\|ZP_04184716.1\| hypothetical protein bcere0028_7140 [Bacillus cereus AH1271], gi\|228... gi\|229177327, gi... - gi\|229177327\|ref\|ZP_04304711.1\| hypothetical protein bcere0005_6990 [Bacillus cereus 172560W], gi\|22... gi\|229154513, gi... - gi\|229154513\|ref\|ZP_04282630.1\| hypothetical protein bcere0010_7100 [Bacillus cereus ATCC 4342], gi\|... gi\|228594431, gi... - gi\|229189011\|ref\|ZP_04316039.1\| hypothetical protein bcere0002_6970 [Bacillus cereus ATCC 10876], gi... gi\|228600275, gi... - gi\|229183136\|ref\|ZP_04310366.1\| hypothetical protein bcere0004_7130 [Bacillus cereus BGSC 6E1], gi\|2...	2.0E-72	[1..189]	[1..189]
gi\|89087445, gi\|... - gi\|89097943\|ref\|ZP_01170830.1\| hypothetical protein B14911_23427 [Bacillus sp. NRRL B-14911], gi\|890...	5.0E-72	[1..184]	[1..198]
gi\|221312585 - gi\|221312585\|ref\|ZP_03594390.1\| hypothetical protein BsubsN3_02484 [Bacillus subtilis subsp. subtili... gi\|221317509 - gi\|221317509\|ref\|ZP_03598803.1\| hypothetical protein BsubsJ_02448 [Bacillus subtilis subsp. subtilis... MCAT_BACSU - Probable manganese catalase OS=Bacillus subtilis (strain 168) GN=ydbD PE=1 SV=1 MCAT_BACSU - Probable manganese catalase OS=Bacillus subtilis GN=ydbD PE=1 SV=1 gi\|221321785 - gi\|221321785\|ref\|ZP_03603079.1\| hypothetical protein BsubsS_02519 [Bacillus subtilis subsp. subtilis...	2.0E-71	[1..184]	[1..198]
gi\|52350063, gi\|... - gi\|52787561\|ref\|YP_093390.1\| YdbD [Bacillus licheniformis ATCC 14580], gi\|52350063\|gb\|AAU42697.1\| Yd...	5.0E-71	[1..184]	[1..198]
gi\|91779770, gi\|... - gi\|91779770\|ref\|YP_554978.1\| non-heme catalase KatN [Burkholderia xenovorans LB400], gi\|91692430\|gb\|...	8.0E-71	[1..189]	[1..215]
gi\|48826056 - ref\|ZP_00287284.1\| COG3546: Mn-containing catalase [Enterococcus faecium] gi\|69244826, gi\|... - gi\|69244826\|ref\|ZP_00603050.1\| Manganese containing catalase [Enterococcus faecium DO], gi\|68196180\|... gi\|293571298\|ref... - manganese catalase [Enterococcus faecium E980] gi\|227552328, gi... - gi\|227552328\|ref\|ZP_03982377.1\| catalase [Enterococcus faecium TX1330], gi\|227178551\|gb\|EEI59523.1\| ...	1.0E-70	[1..185]	[1..200]

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Predicted Domain #1

Region A:
Residues: [1-189]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWIYEKKLQY PVKVGTCNPA LAKLLIEQYG GADGELAAAL RYLNQRYTIP DKVIGLLTDI  60
   61 GTEEFAHLEM IATMVYKLTK DATPEQMKAA GLDPHYVDHD SALHYHNAAG VPFTATYIQA 120
  121 KGDPIADLYE DIAAEEKARA TYQWLINQSD DPDINDSLRF LREREIVHSQ RFREAVEILK 180
  181 EERDRKIYF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	62.69897
Match:	1jkuA
Description:	Manganese catalase (T-catalase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	0.611079735880102	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: