YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30254395, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	71 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30254395, gi|....

Description	E-value	Query Range	Subject Range
gi\|89151551, gi\|... - gi\|89200480\|ref\|ZP_01179233.1\| hypothetical protein Bcer98DRAFT_3080 [Bacillus cereus subsp. cytotox...	127.0	[0..1]	[71..27]
gi\|218231487, gi... - gi\|218231487\|ref\|YP_002365594.1\| cotJA protein [Bacillus cereus B4264], gi\|218159444\|gb\|ACK59436.1\| ... gi\|225862781, gi... - gi\|225862781\|ref\|YP_002748159.1\| cotJA protein [Bacillus cereus 03BB102], gi\|225786357\|gb\|ACO26574.1... gi\|218541148, gi... - gi\|218895851\|ref\|YP_002444262.1\| cotJA protein [Bacillus cereus G9842], gi\|218541148\|gb\|ACK93542.1\| ... gi\|196022432, gi... - gi\|196046720\|ref\|ZP_03113943.1\| cotJA protein [Bacillus cereus 03BB108], gi\|196022432\|gb\|EDX61116.1\|... gi\|206967946, gi... - gi\|206967946\|ref\|ZP_03228902.1\| cotJA protein [Bacillus cereus AH1134], gi\|206736866\|gb\|EDZ54013.1\| ... gi\|228782191, gi... - gi\|228977547\|ref\|ZP_04137939.1\| hypothetical protein bthur0002_7610 [Bacillus thuringiensis Bt407], ... gi\|74491965, gi\|... - gi\|75760537\|ref\|ZP_00740572.1\| CotJA protein [Bacillus thuringiensis serovar israelensis ATCC 35646]... gi\|118476469, gi... - gi\|118476469\|ref\|YP_893620.1\| spore coat-associated protein JA [Bacillus thuringiensis str. Al Hakam...	112.0	[0..1]	[71..1]
gi\|30018982, gi\|... - gi\|30018982\|ref\|NP_830613.1\| CotJA protein [Bacillus cereus ATCC 14579], gi\|29894524\|gb\|AAP07814.1\| ... gi\|229042674, gi... - gi\|229042674\|ref\|ZP_04190414.1\| hypothetical protein bcere0027_7360 [Bacillus cereus AH676], gi\|2287... gi\|228639884, gi... - gi\|229143528\|ref\|ZP_04271953.1\| hypothetical protein bcere0012_6960 [Bacillus cereus BDRD-ST24], gi\|... gi\|229126235, gi... - gi\|229126235\|ref\|ZP_04255253.1\| hypothetical protein bcere0015_6950 [Bacillus cereus BDRD-Cer4], gi\|... gi\|229108408, gi... - gi\|229108408\|ref\|ZP_04238025.1\| hypothetical protein bcere0018_6940 [Bacillus cereus Rock1-15], gi\|2...	111.0	[0..1]	[71..1]
gi\|221312850 - gi\|221312850\|ref\|ZP_03594655.1\| polypeptide composition of the spore coat; required for the assembly... COTJA_BACSU, CTJ... - (Q45536) CotJA protein, Protein CotJA OS=Bacillus subtilis GN=cotJA PE=4 SV=1 gi\|221322050 - gi\|221322050\|ref\|ZP_03603344.1\| polypeptide composition of the spore coat; required for the assembly... gi\|221317774 - gi\|221317774\|ref\|ZP_03599068.1\| polypeptide composition of the spore coat; required for the assembly... COTJA_BACSU - Protein CotJA OS=Bacillus subtilis (strain 168) GN=cotJA PE=4 SV=1	110.0	[0..5]	[70..10]
gi\|89207728, gi\|... - gi\|89207728\|ref\|ZP_01186261.1\| cotJA protein [Bacillus weihenstephanensis KBAB4], gi\|89154306\|gb\|EAR...	108.0	[0..1]	[71..1]
gi\|47564742, gi\|... - gi\|47564742\|ref\|ZP_00235786.1\| CotJA protein-related protein [Bacillus cereus G9241], gi\|47558115\|gb... gi\|42735891, gi\|... - gi\|42779973\|ref\|NP_977220.1\| cotJA protein [Bacillus cereus ATCC 10987], gi\|42735891\|gb\|AAS39828.1\| ...	107.0	[0..5]	[71..1]
gi\|52347419, gi\|... - gi\|52784917\|ref\|YP_090746.1\| CotJA [Bacillus licheniformis ATCC 14580], gi\|52347419\|gb\|AAU40053.1\| C...	103.0	[0..5]	[71..11]
gi\|89085258, gi\|... - gi\|89100024\|ref\|ZP_01172894.1\| spore coat-associated protein JA [Bacillus sp. NRRL B-14911], gi\|8908...	92.0	[0..5]	[70..23]

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Predicted Domain #1

Region A:
Residues: [1-71]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKYMKSYVP YHSPQDPCPP IGKKYYSTPP NLYLGFQPPN LPQFSPKEAL QKGTLWPVFY  60
   61 DYYENPYKKG R

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits