YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30254421, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	114 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30254421, gi|....

Description	E-value	Query Range	Subject Range
gi\|84180564 - gi\|84180564\|gb\|ABC54729.1\| ORF3/QacEdelta1 fusion protein [Vibrio cholerae] gi\|148615590 - gi\|148615590\|gb\|ABQ96632.1\| Orf3/QacEdelta1 fusion protein [Salmonella enterica subsp. enterica sero... gi\|20086228 - gi\|20086228\|gb\|AAM03346.1\| ORF3-QacEdelta1 fusion protein [Proteus mirabilis] gi\|118511776 - gi\|118511776\|emb\|CAD20940.2\| ORF3-QacE (3'CS2) fusion protein [Salmonella enterica subsp. enterica s... gi\|74055072 - gi\|74055072\|gb\|AAZ95873.1\| ORF3-QacEdelta1 fusion protein [Escherichia coli]	8.0E-27	[3..99]	[215..314]
gi\|146401676, gi... - gi\|88941787\|ref\|ZP_01147187.1\| Membrane transporters of cations and cationic drugs-like [Acidiphiliu...	1.0E-26	[4..106]	[183..288]
gi\|287840 - gi\|287840\|emb\|CAA49570.1\| SugEL [Escherichia coli]	2.0E-25	[4..104]	[74..177]
gi\|26248204, gi\|... - gi\|26248204\|ref\|NP_754244.1\| EmrE protein [Escherichia coli CFT073], gi\|26108608\|gb\|AAN80811.1\|AE016... gi\|237705894, gi... - gi\|237705894\|ref\|ZP_04536375.1\| multidrug efflux protein [Escherichia sp. 3_2_53FAA], gi\|226900651\|g... gi\|218365562, gi... - gi\|218558793\|ref\|YP_002391706.1\| multidrug efflux protein [Escherichia coli S88], gi\|218365562\|emb\|C... gi\|218695541, gi... - gi\|218695541\|ref\|YP_002403208.1\| multidrug efflux protein [Escherichia coli 55989], gi\|218352273\|emb... gi\|91072728, gi\|... - gi\|91211154\|ref\|YP_541140.1\| multidrug efflux protein [Escherichia coli UTI89], gi\|91072728\|gb\|ABE07...	2.0E-24	[3..107]	[61..168]
gi\|110642042, gi... - gi\|110642042\|ref\|YP_669772.1\| multidrug efflux protein [Escherichia coli 536], gi\|110343634\|gb\|ABG69... gi\|115513200, gi... - gi\|117624076\|ref\|YP_852989.1\| multidrug efflux protein [Escherichia coli APEC O1], gi\|115513200\|gb\|A... gi\|209919358, gi... - gi\|209919358\|ref\|YP_002293442.1\| multidrug efflux protein [Escherichia coli SE11], gi\|209912617\|dbj\|... gi\|110615455, gi... - gi\|110805907\|ref\|YP_689427.1\| multidrug efflux protein [Shigella flexneri 5 str. 8401], gi\|110615455...	3.0E-24	[3..107]	[56..163]
gi\|67533793, gi\|... - gi\|67545038\|ref\|ZP_00422963.1\| Small multidrug resistance protein [Burkholderia vietnamiensis G4], g...	2.0E-23	[4..106]	[90..195]
gi\|15834383, gi\|... - gi\|15834383\|ref\|NP_313156.1\| suppressor of groEL [Escherichia coli O157:H7], gi\|13364606\|dbj\|BAB3855... gi\|209750462, gi... - pir\|\|A86111 suppresses groEL, may be chaperone [imported] - Escherichia coli (strain O157:H7, substr... gi\|12519132, gi\|... - gi\|15804742\|ref\|NP_290783.1\| suppresses groEL, may be chaperone [Escherichia coli O157:H7 EDL933], g... gi\|15834383, gi\|... - gi\|15834383\|ref\|NP_313156.1\| suppressor of groEL [Escherichia coli O157:H7 str. Sakai], gi\|13364606\|...	2.0E-23	[4..104]	[51..154]
gi\|82546606, gi\|... - gi\|82546606\|ref\|YP_410553.1\| SugE [Shigella boydii Sb227], gi\|81248017\|gb\|ABB68725.1\| SugE [Shigella... gi\|209750458, gi... - gi\|209750464\|gb\|ACI73539.1\| suppressor of groEL [Escherichia coli], gi\|209750458\|gb\|ACI73536.1\| supp... gi\|226840270, gi... - gi\|254037164\|ref\|ZP_04871241.1\| SugEL [Escherichia sp. 1_1_43], gi\|226840270\|gb\|EEH72272.1\| SugEL [E...	6.0E-23	[4..104]	[51..154]

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Predicted Domain #1

Region A:
Residues: [1-114]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNKAWLYVI LTCIFEVFWV FGFNTANTWW HWIIILGVIA VDFHFLSKAC EHLATGTVYA  60
   61 VFAGAGTVGT FLMDVFLFGG SFSVGKLFFI VMVVAGVIGL KLADNKEETV EGAA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	25.39794
Match:	2i68A
Description:	No description for 2i68A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits