YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30261285, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	412 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30261285, gi|....

Description	E-value	Query Range	Subject Range
gi\|56379182, gi\|... - gi\|56419340\|ref\|YP_146658.1\| 3-oxoacyl-(acyl carrier protein) synthase II [Geobacillus kaustophilus ...	0.0	[1..411]	[1..411]
gi\|52079631, gi\|... - gi\|52784994\|ref\|YP_090823.1\| 3-oxoacyl-(acyl carrier protein) synthase II [Bacillus licheniformis AT...	0.0	[1..412]	[1..412]
gi\|186465829, gi... - gi\|23126914\|ref\|ZP_00108795.1\| COG3321: Polyketide synthase modules and related proteins [Nostoc pun...	0.0	[2..410]	[39..462]
gi\|75910941, gi\|... - gi\|75910941\|ref\|YP_325237.1\| Beta-ketoacyl synthase [Anabaena variabilis ATCC 29413], gi\|75704666\|gb...	0.0	[2..411]	[30..457]
gi\|17131773, gi\|... - gi\|17230172\|ref\|NP_486720.1\| polyketide synthase [Nostoc sp. PCC 7120], gi\|17131773\|dbj\|BAB74379.1\| ... gi\|25535295 - pir\|\|AI2140 polyketide synthase [imported] - Nostoc sp. (strain PCC 7120)	0.0	[2..412]	[26..451]
gi\|158320490, gi... - gi\|158320490\|ref\|YP_001512997.1\| Beta-ketoacyl synthase [Alkaliphilus oremlandii OhILAs], gi\|1581406...	0.0	[3..412]	[2..412]
gi\|221313300 - gi\|221313300\|ref\|ZP_03595105.1\| 3-oxoacyl-(acyl carrier protein) synthase II [Bacillus subtilis subs... FABF_BACSU - 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis (strain 168) GN=fabF PE=1 SV=1 gi\|221318224 - gi\|221318224\|ref\|ZP_03599518.1\| 3-oxoacyl-(acyl carrier protein) synthase II [Bacillus subtilis subs... gi\|221322498 - gi\|221322498\|ref\|ZP_03603792.1\| 3-oxoacyl-(acyl carrier protein) synthase II [Bacillus subtilis subs... FABF_BACSU - 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis GN=fabF PE=3 SV=1	0.0	[1..412]	[1..412]

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Predicted Domain #1

Region A:
Residues: [1-412]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKKRVVITG LGAVTPVGTD VETAWENIKK GVSGIGRLTR IDPELFPAKV AAEINDFEVE  60
   61 KYIDKKEARR MDRFTQYAVA AAKMAVADAK LEITEENGPR IGVWIGSGIG GMETYEEQFK 120
  121 IFTEKGPRRV SPFFVPMMIP DMAAGQVSIA TGAKGINTCS VTACASGANS IGDAFKAIQR 180
  181 GDADAMITGG AEAPLTSMAF AGFSSAKALT FNEDPATACR PFDKNRSGFV MGEGSGILIL 240
  241 EELEHALARG AHIYAEIAGY GATGDAFHIT MPAPGGEGGV RAMRQALADA GLQPEDIDYI 300
  301 NAHGTSTDAN EKYETMAIKE TFGEHAYKVA ISSTKSMTGH LLGAAGAVEA IFSIKSITDG 360
  361 VIPPTINYET PDPECDLDYV PNNARHQEVN AVLSNSLGFG GHNAVLVFKS YK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	139.0
Match:	2gqdA
Description:	No description for 2gqdA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits