YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30261469, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	388 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30261469, gi|....

Description	E-value	Query Range	Subject Range
gi\|66044308, gi\|... - gi\|66044308\|ref\|YP_234149.1\| membrane bound O-acyl transferase, MBOAT [Pseudomonas syringae pv. syri...	1.0E-89	[1..382]	[1..375]
gi\|71558191, gi\|... - gi\|71737638\|ref\|YP_273378.1\| alginate biosynthesis protein AlgI [Pseudomonas syringae pv. phaseolico...	5.0E-89	[1..382]	[1..375]
gi\|213967108, gi... - gi\|213967108\|ref\|ZP_03395257.1\| alginate biosynthesis protein AlgI [Pseudomonas syringae pv. tomato ... ALGI_PSESM - Probable poly(beta-D-mannuronate) O-acetylase OS=Pseudomonas syringae pv. tomato GN=algI PE=3 SV=1 ALGI_PSESM - Probable alginate O-acetylase AlgI OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=algI PE=3 S...	7.0E-89	[1..381]	[1..374]
ALGI_PSEAE - Probable alginate O-acetylase AlgI OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 10... ALGI_PSEAE - Probable poly(beta-D-mannuronate) O-acetylase OS=Pseudomonas aeruginosa GN=algI PE=3 SV=2	4.0E-87	[1..382]	[1..375]
gi\|77457179, gi\|... - gi\|77457179\|ref\|YP_346684.1\| membrane bound O-acyl transferase, MBOAT [Pseudomonas fluorescens Pf0-1...	6.0E-87	[1..382]	[1..375]
gi\|163861481, gi... - gi\|89204397\|ref\|ZP_01182974.1\| Membrane bound O-acyl transferase, MBOAT [Bacillus weihenstephanensis...	1.0E-86	[1..388]	[1..388]
gi\|116051546, gi... - gi\|116051546\|ref\|YP_789617.1\| alginate o-acetyltransferase AlgI [Pseudomonas aeruginosa UCBPP-PA14],...	1.0E-86	[1..382]	[1..375]
gi\|84325862 - gi\|84325862\|ref\|ZP_00973894.1\| COG1696: Predicted membrane protein involved in D-alanine export [Pse...	1.0E-86	[25..382]	[14..369]
gi\|126168401, gi... - gi\|254236470\|ref\|ZP_04929793.1\| alginate o-acetyltransferase AlgI [Pseudomonas aeruginosa C3719], gi... gi\|218770448, gi... - gi\|218890225\|ref\|YP_002439089.1\| alginate o-acetyltransferase AlgI [Pseudomonas aeruginosa LESB58], ... gi\|1245347 - gi\|1245347\|gb\|AAB09781.1\| AlgI	2.0E-86	[1..382]	[1..375]
gi\|94415312 - gi\|94415312\|ref\|ZP_01295156.1\| hypothetical protein PaerP_01002865 [Pseudomonas aeruginosa PA7]	2.0E-86	[25..382]	[14..369]

Back

Predicted Domain #1

Region A:
Residues: [1-211]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAYGSFYFF AIVGILLIPT IIAGLKGKML RKYNAVLTLV MIAIIFSDKP KQAIMLAAFI  60
   61 IWQYALIKGY LLLRKQNNST FMFCIAVILS ILPLILAKIA PFVPELHFIV FAGMSYVTFR 120
  121 AVQMVFEVRD NLIKELSFFN FWEFVLFFPA ISSGPIDRYR RFQKDIQKPP SAEEYQNLLY 180
  181 TGLNRIFQGF LYKFIIAHLI TTYLVKAVFA N

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [212-388]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QDTLLSNVIF MYATSMQLFF DFAGYSAFVI GISYMMGIKT PENFNKPFLS RNIKDFWNRW  60
   61 HMSLSFWFRD FIYMRFVFFA TKKKLIKNRY TISYIGAFLN FFIMGIWHIQ GSAVAQYVIY 120
  121 GLYHAALFIL FDIFERKNKK HKFWPNNKFT HVLAIVITFH VVCFGFLIFS GHLNRYF

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits