YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30261514, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	233 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30261514, gi|....

Description	E-value	Query Range	Subject Range
gi\|88698686, gi\|... - gi\|88707036\|ref\|ZP_01104732.1\| CDP-alcohol phosphatidyltransferase family protein [gamma proteobacte...	1.0E-39	[4..199]	[84..289]
gi\|78360297, gi\|... - gi\|78367652\|ref\|ZP_00837917.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Shewanella sp. ...	4.0E-39	[4..228]	[15..242]
gi\|68555597, gi\|... - gi\|94309861\|ref\|YP_583071.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Ralstonia metalli...	1.0E-38	[4..224]	[51..281]
gi\|159121111, gi... - gi\|94494129\|ref\|ZP_01301332.1\| hypothetical protein Rgryl_01000661 [Rickettsiella grylli], gi\|160872...	1.0E-38	[4..228]	[46..278]
gi\|68548599, gi\|... - gi\|68548599\|ref\|ZP_00588081.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Shewanella amaz...	2.0E-38	[4..223]	[15..240]
gi\|85694935, gi\|... - gi\|85711022\|ref\|ZP_01042082.1\| Phosphatidylserine synthase [Idiomarina baltica OS145], gi\|85694935\|g...	4.0E-38	[4..219]	[20..241]
gi\|90022183, gi\|... - gi\|90022183\|ref\|YP_528010.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Saccharophagus de...	6.0E-38	[4..220]	[42..265]
gi\|207742723, gi... - gi\|207742723\|ref\|YP_002259115.1\| cdp-diacylglycerol--serine o-phosphatidyltransferase protein [Ralst... gi\|83727037, gi\|... - gi\|83746287\|ref\|ZP_00943340.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Ralstonia solan...	9.0E-38	[4..232]	[46..284]
gi\|17429092 - gi\|17429092\|emb\|CAD15780.1\| putative cdp-diacylglycerol--serine o-phosphatidyltransferase protein [R... gi\|17546792 - gi\|17546792\|ref\|NP_520194.1\| putative CDP-diacylglycerol--serine O-phosphatidyltransferase protein [...	1.0E-37	[4..232]	[45..283]
gi\|67548313, gi\|... - gi\|67548313\|ref\|ZP_00426204.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Burkholderia vi...	3.0E-37	[4..228]	[50..284]

Back

Predicted Domain #1

Region A:
Residues: [1-233]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRAAIPNLF TLGNLYSGFL SIGYASLGYY KSAAILVLIG MMLDSLDGRV ARLLRVDSQM  60
   61 GKELDSLADV VTFGAAPAVL MYYTSFSNYG IIGLYIAGLF PLFGAYRLAR FNVTPSSTSM 120
  121 KYFTGVPITA AGGLVAFLTL FSHTIPKIVL ITVFVTFAFL MVSRIRIPSL KDVPIPRYSI 180
  181 IITLFLVGII ITMYQTGFGN FSVFLFIAIP LYILYMLSQF LRQRPSKRAN KEK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	17.537602
Match:	PF01066.12
Description:	No description for PF01066.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits