YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30256652, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	272 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30256652, gi|....

Description	E-value	Query Range	Subject Range
NADE_BACHK - NH(3)-dependent NAD(+) synthetase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=nadE ... NADE_BACHK - NH(3)-dependent NAD(+) synthetase OS=Bacillus thuringiensis subsp. konkukian GN=nadE PE=3 SV=1	1.0E-64	[1..272]	[1..272]
gi\|228656049, gi... - gi\|229127430\|ref\|ZP_04256424.1\| NH(3)-dependent NAD(+) synthetase [Bacillus cereus BDRD-Cer4], gi\|22... gi\|228638879, gi... - gi\|229144639\|ref\|ZP_04273041.1\| NH(3)-dependent NAD(+) synthetase [Bacillus cereus BDRD-ST24], gi\|22... gi\|228725563, gi... - gi\|229043791\|ref\|ZP_04191490.1\| NH(3)-dependent NAD(+) synthetase [Bacillus cereus AH676], gi\|228725... gi\|228673984, gi... - gi\|229109487\|ref\|ZP_04239079.1\| NH(3)-dependent NAD(+) synthetase [Bacillus cereus Rock1-15], gi\|228... NADE_BACCR - NH(3)-dependent NAD(+) synthetase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 1...	1.0E-64	[1..272]	[1..272]
NADE_BACWK - NH(3)-dependent NAD(+) synthetase OS=Bacillus weihenstephanensis (strain KBAB4) GN=nadE PE=3 SV=1	2.0E-64	[1..272]	[1..272]
NADE_BACC1 - NH(3)-dependent NAD(+) synthetase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=nadE PE=3 SV=1	2.0E-64	[1..272]	[1..272]
NADE_BACCN - NH(3)-dependent NAD(+) synthetase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / ...	1.0E-63	[1..272]	[1..272]
gi\|74492959, gi\|... - gi\|75759528\|ref\|ZP_00739617.1\| NH(3)-dependent NAD(+) synthetase [Bacillus thuringiensis serovar isr...	2.0E-63	[1..272]	[1..271]
NADE_BACHD - NH(3)-dependent NAD(+) synthetase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 734... NADE_BACHD - NH(3)-dependent NAD(+) synthetase OS=Bacillus halodurans GN=nadE PE=3 SV=1	1.0E-62	[3..272]	[1..272]
gi\|221312449 - gi\|221312449\|ref\|ZP_03594254.1\| NAD synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi\|221317383 - gi\|221317383\|ref\|ZP_03598677.1\| NAD synthetase [Bacillus subtilis subsp. subtilis str. JH642] gi\|221321646 - gi\|221321646\|ref\|ZP_03602940.1\| NAD synthetase [Bacillus subtilis subsp. subtilis str. SMY] NADE_BACSU - NH(3)-dependent NAD(+) synthetase OS=Bacillus subtilis GN=nadE PE=1 SV=5 NADE_BACSU - NH(3)-dependent NAD(+) synthetase OS=Bacillus subtilis (strain 168) GN=nadE PE=1 SV=5	2.0E-61	[1..272]	[1..272]
gi\|116609169, gi... - gi\|66963386\|ref\|ZP_00410958.1\| NAD+ synthase [Arthrobacter sp. FB24], gi\|66871046\|gb\|EAL98410.1\| NAD...	4.0E-61	[3..272]	[4..273]
NADE_EXIS2 - NH(3)-dependent NAD(+) synthetase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-1...	1.0E-60	[3..272]	[1..271]

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Predicted Domain #1

Region A:
Residues: [1-272]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLQEQIMKA LHVQPVIDPK AEIRKRVDFL KDYVKKTGAK GFVLGISGGQ DSTLAGRLAQ  60
   61 LAVEEIRNEG GNATFIAVRL PYKVQKDEDD AQLALQFIQA DQSVAFDIAS TVDAFSNQYE 120
  121 NLLDESLTDF NKGNVKARIR MVTQYAIGGQ KGLLVIGTDH AAEAVTGFFT KFGDGGADLL 180
  181 PLTGLTKRQG RALLQELGAD ERLYLKMPTA DLLDEKPGQA DETELGITYD QLDDYLEGKT 240
  241 VPADVAEKIE KRYTVSEHKR QVPASMFDDW WK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	66.522879
Match:	2pz8A
Description:	No description for 2pz8A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits