YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30256882, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	162 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30256882, gi|....

Description	E-value	Query Range	Subject Range
DYR_BACSU - Dihydrofolate reductase OS=Bacillus subtilis (strain 168) GN=dfrA PE=1 SV=2 DYR_BACSU - Dihydrofolate reductase OS=Bacillus subtilis GN=dfrA PE=1 SV=2 gi\|221323614 - gi\|221323614\|ref\|ZP_03604908.1\| dihydrofolate reductase [Bacillus subtilis subsp. subtilis str. SMY] gi\|221319339 - gi\|221319339\|ref\|ZP_03600633.1\| dihydrofolate reductase [Bacillus subtilis subsp. subtilis str. JH64... gi\|221314416 - gi\|221314416\|ref\|ZP_03596221.1\| dihydrofolate reductase [Bacillus subtilis subsp. subtilis str. NCIB...	2.0E-59	[2..161]	[1..160]
gi\|143742, gi\|66101 - pir\|\|RDBSD dihydrofolate reductase (EC 1.5.1.3) - Bacillus subtilis, gi\|143742\|gb\|AAA22853.1\| dihyd...	3.0E-59	[2..161]	[1..160]
gi\|89202949, gi\|... - gi\|89202949\|ref\|ZP_01181652.1\| Dihydrofolate reductase [Bacillus cereus subsp. cytotoxis NVH 391-98]...	1.0E-57	[1..162]	[1..162]
gi\|17427958 - gi\|17427958\|emb\|CAD14648.1\| probable dihydrofolate reductase oxidoreductase protein [Ralstonia solan... gi\|17545665 - gi\|17545665\|ref\|NP_519067.1\| dihydrofolate reductase oxidoreductase protein [Ralstonia solanacearum ...	2.0E-57	[3..160]	[4..161]
gi\|83727479, gi\|... - gi\|83745789\|ref\|ZP_00942846.1\| Dihydrofolate reductase [Ralstonia solanacearum UW551], gi\|83727479\|g... gi\|207743703, gi... - gi\|207743703\|ref\|YP_002260095.1\| dihydrofolate reductase protein [Ralstonia solanacearum IPO1609], g... gi\|206590567, gi... - gi\|207725331\|ref\|YP_002255727.1\| dihydrofolate reductase protein [Ralstonia solanacearum MolK2], gi\|...	2.0E-57	[3..160]	[4..161]
gi\|89100588, gi\|... - gi\|89100588\|ref\|ZP_01173447.1\| dihydrofolate reductase [Bacillus sp. NRRL B-14911], gi\|89084692\|gb\|E...	4.0E-57	[2..162]	[1..163]
gi\|29895877, gi\|... - gi\|30020326\|ref\|NP_831957.1\| dihydrofolate reductase [Bacillus cereus ATCC 14579], gi\|29895877\|gb\|AA... gi\|228655713, gi... - gi\|229127636\|ref\|ZP_04256625.1\| Dihydrofolate reductase [Bacillus cereus BDRD-Cer4], gi\|228655713\|gb... gi\|228673721, gi... - gi\|229109680\|ref\|ZP_04239266.1\| Dihydrofolate reductase [Bacillus cereus Rock1-15], gi\|228673721\|gb\|... gi\|228725362, gi... - gi\|229043980\|ref\|ZP_04191672.1\| Dihydrofolate reductase [Bacillus cereus AH676], gi\|228725362\|gb\|EEL... gi\|228958507, gi... - gi\|228958507\|ref\|ZP_04120227.1\| Dihydrofolate reductase [Bacillus thuringiensis serovar pakistani st... gi\|229150462, gi... - gi\|229150462\|ref\|ZP_04278678.1\| Dihydrofolate reductase [Bacillus cereus m1550], gi\|228632955\|gb\|EEK... gi\|218159681, gi... - gi\|218231724\|ref\|YP_002366937.1\| dihydrofolate reductase [Bacillus cereus B4264], gi\|218159681\|gb\|AC... gi\|228638554, gi... - gi\|229144832\|ref\|ZP_04273229.1\| Dihydrofolate reductase [Bacillus cereus BDRD-ST24], gi\|228638554\|gb...	7.0E-57	[1..162]	[1..162]
gi\|47553185, gi\|... - gi\|47570166\|ref\|ZP_00240822.1\| dihydrofolate reductase [Bacillus cereus G9241], gi\|47553185\|gb\|EAL11...	8.0E-57	[1..162]	[1..162]
gi\|113868662, gi... - gi\|113868662\|ref\|YP_727151.1\| dihydrofolate reductase [Ralstonia eutropha H16], gi\|113527438\|emb\|CAJ...	2.0E-56	[3..160]	[4..160]
gi\|75764379, gi\|... - gi\|75764379\|ref\|ZP_00743895.1\| Dihydrofolate reductase [Bacillus thuringiensis serovar israelensis A...	2.0E-56	[1..162]	[24..185]

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Predicted Domain #1

Region A:
Residues: [1-162]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVSFMVAMD ENRVIGKDNN LPWRLPSELQ YVKKTTMGHP LIMGRKNYEA IGRPLPGRRN  60
   61 IIVTRNEGYH VEGCEVAHSV EEVFELCKNE EEIFIFGGAQ IYDLFLPYVD KLYITKIHHA 120
  121 FEGDTFFPEM DMTNWKEVFV EKGLTDEKNP YTYYYHVYEK QQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	58.0
Match:	2qk8A
Description:	No description for 2qk8A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits