YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30256989, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	296 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30256989, gi|....

Description	E-value	Query Range	Subject Range
gi\|56419562, gi\|... - gi\|56419562\|ref\|YP_146880.1\| 3-hydroxyisobutyrate dehydrogenase [Geobacillus kaustophilus HTA426], g...	7.0E-55	[1..287]	[1..285]
gi\|228794314, gi... - gi\|228965324\|ref\|ZP_04126416.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus thuringiensis serovar s... gi\|228900951, gi... - gi\|228900951\|ref\|ZP_04065164.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus thuringiensis IBL 4222]... gi\|75762984, gi\|... - gi\|75762984\|ref\|ZP_00742781.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus thuringiensis serovar is...	1.0E-54	[1..296]	[1..296]
gi\|218161637, gi... - gi\|218233680\|ref\|YP_002367036.1\| putative 2-hydroxy-3-oxopropionate reductase [Bacillus cereus B4264... gi\|30020421, gi\|... - gi\|30020421\|ref\|NP_832052.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus cereus ATCC 14579], gi\|298... gi\|228725252, gi... - gi\|229044081\|ref\|ZP_04191768.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus cereus AH676], gi\|22872... gi\|228632864, gi... - gi\|229150555\|ref\|ZP_04278770.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus cereus m1550], gi\|22863... gi\|229144928, gi... - gi\|229144928\|ref\|ZP_04273325.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus cereus BDRD-ST24], gi\|2... gi\|229127730, gi... - gi\|229127730\|ref\|ZP_04256719.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus cereus BDRD-Cer4], gi\|2... gi\|228673620, gi... - gi\|229109775\|ref\|ZP_04239360.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus cereus Rock1-15], gi\|22...	2.0E-54	[1..296]	[1..296]
gi\|229133185, gi... - gi\|229133185\|ref\|ZP_04262018.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus cereus BDRD-ST196], gi\|... gi\|228749669, gi... - gi\|229011605\|ref\|ZP_04168789.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus mycoides DSM 2048], gi\|... gi\|163862322, gi... - gi\|89205508\|ref\|ZP_01184077.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus weihenstephanensis KBAB4...	7.0E-54	[1..296]	[1..296]
gi\|47565709, gi\|... - gi\|47565709\|ref\|ZP_00236749.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus cereus G9241], gi\|475573...	9.0E-54	[1..296]	[1..296]
gi\|42737366, gi\|... - gi\|42781444\|ref\|NP_978691.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus cereus ATCC 10987], gi\|427...	1.0E-53	[1..296]	[1..296]
gi\|25283624 - pir\|\|G90314 oxidoreductase [imported] - Sulfolobus solfataricus gi\|15898379, gi\|... - gi\|15898379\|ref\|NP_342984.1\| oxidoreductase [Sulfolobus solfataricus P2], gi\|13814790\|gb\|AAK41774.1\|... gi\|241217428, gi... - gi\|241770891\|ref\|ZP_04768288.1\| 6-phosphogluconate dehydrogenase NAD-binding [Sulfolobus solfataricu...	3.0E-53	[2..289]	[1..286]
gi\|25283637 - pir\|\|G97310 dehydrogenase related to 3-hydroxyisobutyrate dehydrogenase, YKWC B. subtilis ortholog [... gi\|15896585, gi\|... - gi\|15896585\|ref\|NP_349934.1\| 3-hydroxyisobutyrate dehydrogenase [Clostridium acetobutylicum ATCC 824...	3.0E-53	[2..289]	[6..291]
gi\|49478504, gi\|... - gi\|49478504\|ref\|YP_038103.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus thuringiensis serovar konk... gi\|218905179, gi... - gi\|218905179\|ref\|YP_002453013.1\| 2-hydroxy-3-oxopropionate reductase [Bacillus cereus AH820], gi\|218... gi\|52141450, gi\|... - gi\|52141450\|ref\|YP_085380.1\| 3-hydroxyisobutyrate dehydrogenase; 6-phosphogluconate dehydrogenase [B... gi\|196034924, gi... - gi\|196034924\|ref\|ZP_03102331.1\| 2-hydroxy-3-oxopropionate reductase [Bacillus cereus W], gi\|19599246... gi\|228811750, gi... - gi\|228947763\|ref\|ZP_04110050.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus thuringiensis serovar m... gi\|228935363, gi... - gi\|228935363\|ref\|ZP_04098183.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus thuringiensis serovar a... gi\|228830382, gi... - gi\|228929092\|ref\|ZP_04092119.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus thuringiensis serovar p... gi\|228842870, gi... - gi\|228916683\|ref\|ZP_04080248.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus thuringiensis serovar p... gi\|228659701, gi... - gi\|229123566\|ref\|ZP_04252761.1\| 3-hydroxyisobutyrate dehydrogenase [Bacillus cereus 95/8201], gi\|228...	8.0E-53	[4..287]	[8..289]

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Predicted Domain #1

Region A:
Residues: [1-296]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIGFIGLG NMGLPMSKNL VKSNYTVYGV DLNKDAEASF EKEGGIIGLS ISKLAETCDV  60
   61 IFTSLPSPRA VEAVYFGQEG LFENSHSNVV LIDTSTVSPQ LNKQLEEAAK EKKVDFLAAP 120
  121 VSGGVIGAEN RTLTFMVGGS KEVYEKTESI MGVLGANIFH VSEQIDSGTT VKLINNLLIG 180
  181 FYTAGVSEAL TLAKKNNMDL DKMFDILNVS YGQSRIYERN YKSFIASENY EPGFTVNLLK 240
  241 KDLGFAVDLA KESELHLPVS EMLLNVYEEA SEAGYGENDM AALYKKVSEQ LISNQK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	50.522879
Match:	2i9pA
Description:	No description for 2i9pA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits