YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|51975296, gi\|...
Organism:	Bacillus cereus E33L
Length:	90 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|51975296, gi|....

Description	E-value	Query Range	Subject Range
gi\|49177403, gi\|... - gi\|49183476\|ref\|YP_026728.1\| prophage LambdaBa04, DNA packaging protein, putative [Bacillus anthraci... gi\|47551524, gi\|... - gi\|47777819\|ref\|YP_022534.1\| prophage lambdaba04, DNA packaging protein, putative [Bacillus anthraci... gi\|30260632, gi\|... - gi\|30260632\|ref\|NP_843009.1\| prophage LambdaBa04, DNA packaging protein, putative [Bacillus anthraci... gi\|65317895, gi\|... - gi\|65317895\|ref\|ZP_00390854.1\| hypothetical protein Bant_01001096 [Bacillus anthracis str. A2012], r... gi\|227007002, gi... - gi\|227816658\|ref\|YP_002816667.1\| putative prophage LambdaBa04, DNA packaging protein [Bacillus anthr... gi\|229601063, gi... - gi\|229601063\|ref\|YP_002865076.1\| putative prophage LambdaBa04, DNA packaging protein [Bacillus anthr... gi\|167529855, gi... - gi\|167634781\|ref\|ZP_02393100.1\| putative prophage LambdaBa04, DNA packaging protein [Bacillus anthra... gi\|254686862 - gi\|254686862\|ref\|ZP_05150720.1\| putative prophage LambdaBa04, DNA packaging protein [Bacillus anthra... gi\|164713507, gi... - gi\|165870673\|ref\|ZP_02215326.1\| putative prophage LambdaBa04, DNA packaging protein [Bacillus anthra... gi\|254724936, gi... - gi\|254725941\|ref\|ZP_05187723.1\| putative prophage LambdaBa04, DNA packaging protein [Bacillus anthra... gi\|170688616, gi... - gi\|170688616\|ref\|ZP_02879822.1\| putative prophage LambdaBa04, DNA packaging protein [Bacillus anthra... gi\|254738912 - gi\|254738912\|ref\|ZP_05196614.1\| putative prophage LambdaBa04, DNA packaging protein [Bacillus anthra... gi\|167640808, gi... - gi\|167640808\|ref\|ZP_02399067.1\| putative prophage LambdaBa04, DNA packaging protein [Bacillus anthra... gi\|254744502 - gi\|254744502\|ref\|ZP_05202181.1\| putative prophage LambdaBa04, DNA packaging protein [Bacillus anthra... gi\|172080394, gi... - gi\|177655009\|ref\|ZP_02936703.1\| putative prophage LambdaBa04, DNA packaging protein [Bacillus anthra... gi\|254756243 - gi\|254756243\|ref\|ZP_05208272.1\| putative prophage LambdaBa04, DNA packaging protein [Bacillus anthra... gi\|170127936, gi... - gi\|170707158\|ref\|ZP_02897614.1\| putative prophage LambdaBa04, DNA packaging protein [Bacillus anthra... gi\|254762062 - gi\|254762062\|ref\|ZP_05213911.1\| putative prophage LambdaBa04, DNA packaging protein [Bacillus anthra... gi\|190561402, gi... - gi\|190567615\|ref\|ZP_03020528.1\| putative prophage LambdaBa04, DNA packaging protein [Bacillus anthra...	141.0	[0..1]	[90..1]
gi\|163863540, gi... - gi\|89208684\|ref\|ZP_01187177.1\| Uncharacterized phage protein (possible DNA packaging) [Bacillus weih...	137.0	[0..1]	[90..1]
gi\|82745488, gi\|... - gi\|82745488\|ref\|ZP_00908000.1\| Uncharacterized phage protein (possible DNA packaging) [Clostridium b...	66.0	[0..1]	[89..1]

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Predicted Domain #1

Region A:
Residues: [1-90]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLDVVKKAV RISHSALDDE LEDLIEASRY DLKLSGVSHL KANDDTDPLI KRAIITYVKA  60
   61 NFISDAKEAE RFLASYNMLK NHLTLAGDYK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

		MCM Score	SCOP Match	SCOP Description
View	Download	0.689	a.1.1	Globin-like
View	Download	0.682	a.126.1	Serum albumin-like
View	Download	0.682	a.126.1	Serum albumin-like
View	Download	0.668	a.1.1	Globin-like
View	Download	0.668	a.1.1	Globin-like
View	Download	0.663	d.56.1	GroEL-intermediate domain like
View	Download	0.641	a.74.1	Cyclin-like
View	Download	0.641	a.74.1	Cyclin-like
View	Download	0.631	a.77.1	DEATH domain
View	Download	0.587	a.8.11	Description not found.
View	Download	0.488	d.58.48	MTH1187-like
View	Download	0.349	a.23.1	HSC20 (HSCB), C-terminal oligomerisation domain
View	Download	0.263	a.16.1	S15/NS1 RNA-binding domain
View	Download	0.260	a.126.1	Serum albumin-like

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits