YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|49186510, gi\|...
Organism:	Bacillus anthracis str. Sterne
Length:	194 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49186510, gi|....

Description	E-value	Query Range	Subject Range
gi\|65320987 - gi\|65320987\|ref\|ZP_00393946.1\| COG3740: Phage head maturation protease [Bacillus anthracis str. A201...	4.0E-63	[1..194]	[3..196]
gi\|163863543, gi... - gi\|89208681\|ref\|ZP_01187174.1\| Peptidase U35, phage prohead HK97 [Bacillus weihenstephanensis KBAB4]...	2.0E-62	[1..194]	[1..194]
gi\|47525739, gi\|... - gi\|47525739\|ref\|YP_017088.1\| prophage lambdaba04, prohead protease, putative [Bacillus anthracis str... gi\|30260629, gi\|... - gi\|30260629\|ref\|NP_843006.1\| prophage LambdaBa04, prohead protease, putative [Bacillus anthracis str... gi\|49183473, gi\|... - gi\|49183473\|ref\|YP_026725.1\| prophage LambdaBa04, prohead protease, putative [Bacillus anthracis str...	1.0E-55	[1..192]	[4..195]
gi\|29344756, gi\|... - gi\|29377290\|ref\|NP_816444.1\| prohead protease [Enterococcus faecalis V583], gi\|29344756\|gb\|AAO82514.... gi\|229549066, gi... - gi\|229549066\|ref\|ZP_04437791.1\| prohead protease [Enterococcus faecalis ATCC 29200], gi\|229305859\|gb...	1.0E-50	[1..192]	[1..190]
gi\|19908299, gi\|... - gi\|20065968\|ref\|NP_612834.1\| putative prohead protease [Clostridium phage phi3626], gi\|19908299\|gb\|A... gi\|170710743, gi... - gi\|170710743\|gb\|EDT22925.1\| phage prohead protease, HK97 family [Clostridium perfringens B str. ATCC...	6.0E-48	[3..193]	[7..200]
gi\|110675757, gi... - gi\|110801110\|ref\|YP_696028.1\| HK97 family phage prohead protease [Clostridium perfringens ATCC 13124...	2.0E-46	[3..193]	[7..200]
gi\|18144782, gi\|... - gi\|18310103\|ref\|NP_562037.1\| phage phi-C31 gp35-like protein [Clostridium perfringens str. 13], gi\|1...	4.0E-45	[1..183]	[1..184]
gi\|82726717, gi\|... - gi\|82745486\|ref\|ZP_00907998.1\| Peptidase U35, phage prohead HK97 [Clostridium beijerincki NCIMB 8052...	1.0E-44	[1..194]	[1..197]

Back

Predicted Domain #1

Region A:
Residues: [1-194]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKTEKRELL SSALEIRELE NGLRTISGYA VKWEMKSVTM GYWQRFKEQF KKGAFTESLT  60
   61 QDDQLALWSH DTSQVLGRTK NGTLRLFEDE IGLRFELDLA NTTLGNDTYE TIKRGDVDGV 120
  121 SFGFQMVKEE WDESDPDNVV RSVTKAKLLE ISPVAFPAYP DSQVSARSHD PYKQFVKERN 180
  181 QKELRKKLIL KTYL

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	73.136677
Match:	PF04586.8
Description:	No description for PF04586.8 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits