YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30263813, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	323 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30263813, gi|....

Description	E-value	Query Range	Subject Range
gi\|42738824, gi\|... - gi\|42782897\|ref\|NP_980144.1\| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus cereus...	0.0	[1..323]	[1..323]
gi\|65321136 - gi\|65321136\|ref\|ZP_00394095.1\| COG0196: FAD synthase [Bacillus anthracis str. A2012] gi\|228916446, gi... - gi\|228916446\|ref\|ZP_04080012.1\| FMN adenylyltransferase [Bacillus thuringiensis serovar pulsiensis B... gi\|228935123, gi... - gi\|228935123\|ref\|ZP_04097950.1\| FMN adenylyltransferase [Bacillus thuringiensis serovar andalousiens... gi\|228928857, gi... - gi\|228928857\|ref\|ZP_04091889.1\| FMN adenylyltransferase [Bacillus thuringiensis serovar pondicherien... gi\|228660098, gi... - gi\|229123322\|ref\|ZP_04252526.1\| FMN adenylyltransferase [Bacillus cereus 95/8201], gi\|228660098\|gb\|E... gi\|228812048, gi... - gi\|228947528\|ref\|ZP_04109818.1\| FMN adenylyltransferase [Bacillus thuringiensis serovar monterrey BG... gi\|118418254, gi... - gi\|118479029\|ref\|YP_896180.1\| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus thuri... gi\|228597465, gi... - gi\|229186046\|ref\|ZP_04313216.1\| FMN adenylyltransferase [Bacillus cereus BGSC 6E1], gi\|228597465\|gb\|...	0.0	[2..323]	[14..335]
gi\|47569086, gi\|... - gi\|47569086\|ref\|ZP_00239775.1\| riboflavin biosynthesis protein RibF [Bacillus cereus G9241], gi\|4755...	0.0	[2..323]	[14..335]
gi\|218231861, gi... - gi\|218231861\|ref\|YP_002368610.1\| riboflavin biosynthesis protein RibF [Bacillus cereus B4264], gi\|21... gi\|29897454, gi\|... - gi\|30021898\|ref\|NP_833529.1\| bifunctional riboflavin kinase/FMN adenylyltransferase [Bacillus cereus...	0.0	[1..323]	[1..323]
gi\|163863743, gi... - gi\|89206981\|ref\|ZP_01185531.1\| Riboflavin kinase / FAD synthetase:Cytidyltransferase-related [Bacill...	0.0	[1..323]	[1..323]
gi\|15603526, gi\|... - gi\|15603526\|ref\|NP_246600.1\| bifunctional riboflavin kinase/FMN adenylyltransferase [Pasteurella mul...	1.0E-96	[1..314]	[1..310]
gi\|91227671, gi\|... - gi\|91227671\|ref\|ZP_01261948.1\| hypothetical protein V12G01_13339 [Vibrio alginolyticus 12G01], gi\|91...	1.0E-96	[1..314]	[1..310]
gi\|75853599, gi\|... - gi\|75853599\|ref\|ZP_00761405.1\| COG0196: FAD synthase [Vibrio sp. Ex25], gi\|254230239\|ref\|ZP_04923630...	1.0E-96	[1..314]	[1..310]
gi\|28805516, gi\|... - gi\|28897307\|ref\|NP_796912.1\| bifunctional riboflavin kinase/FMN adenylyltransferase [Vibrio parahaem... gi\|28805516 - gi\|28805516\|dbj\|BAC58796.1\| riboflavin kinase/FMN adenylyltransferase [Vibrio parahaemolyticus RIMD ...	3.0E-96	[1..315]	[1..311]
gi\|16800434 - gi\|16800434\|ref\|NP_470702.1\| hypothetical protein lin1366 [Listeria innocua Clip11262] gi\|25302151, gi\|... - pir\|\|AE1603 riboflavin kinase and FAD synthase homolog ribC [imported] - Listeria innocua (strain Cl...	3.0E-96	[1..314]	[1..313]

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Predicted Domain #1

Region A:
Residues: [1-323]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLIHLTHPH EQNKLELPPT VMALGFFDGI HLGHQCVIRT AKQIADEKGY KSAVMTFYPH  60
   61 PSVVLGKKEA HAEYITPMCD KEKIVESLGI DILYVVKFDE SFAGLLPQQF VDDYIIGLNV 120
  121 KHVVAGFDYS YGRLGKGKME TLPFHARGEF TQTVIEKVEF QEEKVSSTAL RKLIRNGEME 180
  181 QIPSILGRAY TVGGTVVHGD KRGRQIGFPT ANVGLSDEYL LPPVGVYAVR LQVHGEWYDG 240
  241 VCNIGYKPTF KEDERQLSIE VHLFEFNNDI YDQNVTVEWH MRIREEKKFN GIDELVEQIA 300
  301 KDKKTAQEYF ANEKNILAFS NEK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	61.69897
Match:	1mrzA
Description:	Crystal structure of a flavin binding protein from Thermotoga Maritima, TM379
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits