YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|21401895, gi\|...
Organism:	Bacillus anthracis str. A2012
Length:	363 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21401895, gi|....

Description	E-value	Query Range	Subject Range
gi\|41407996, gi\|... - gi\|41407996\|ref\|NP_960832.1\| hypothetical protein MAP1898c [Mycobacterium avium subsp. paratuberculo...	9.0E-97	[8..360]	[99..451]
FTSW_PSEA6 - Putative lipid II flippase FtsW OS=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) GN=ftsW ...	3.0E-95	[3..362]	[26..386]
gi\|88774162, gi\|... - gi\|88794396\|ref\|ZP_01110104.1\| cell division protein FtsW [Alteromonas macleodii 'Deep ecotype'], gi...	4.0E-93	[5..362]	[26..384]
gi\|20808073 - gi\|20808073\|ref\|NP_623244.1\| Bacterial cell division membrane protein [Thermoanaerobacter tengcongen... gi\|20808073, gi\|... - gi\|20808073\|ref\|NP_623244.1\| cell division membrane protein [Thermoanaerobacter tengcongensis MB4], ...	6.0E-93	[2..361]	[4..363]
gi\|134051242, gi... - gi\|88945450\|ref\|ZP_01148620.1\| stage V sporulation protein E [Desulfotomaculum reducens MI-1], gi\|88...	2.0E-91	[2..361]	[5..364]
gi\|66575144, gi\|... - gi\|66769812\|ref\|YP_244574.1\| cell division protein [Xanthomonas campestris pv. campestris str. 8004]... gi\|188993027, gi... - gi\|188993027\|ref\|YP_001905037.1\| septum-peptidoglycan biosynthetic protein [Xanthomonas campestris p... gi\|21230198, gi\|... - gi\|21230198\|ref\|NP_636115.1\| cell division protein [Xanthomonas campestris pv. campestris str. ATCC ...	4.0E-91	[4..360]	[17..372]
FTSW_GEOMG - Putative lipid II flippase FtsW OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) ...	4.0E-91	[4..362]	[14..372]
gi\|108770642, gi... - gi\|108800223\|ref\|YP_640420.1\| cell division protein FtsW [Mycobacterium sp. MCS], gi\|108770642\|gb\|AB... gi\|119869351, gi... - gi\|92915588\|ref\|ZP_01284211.1\| Cell cycle protein [Mycobacterium sp. KMS], gi\|92440324\|gb\|EAS98168.1... gi\|92434724, gi\|... - gi\|92908704\|ref\|ZP_01277483.1\| Cell cycle protein [Mycobacterium sp. JLS], gi\|92434724\|gb\|EAS94056.1...	6.0E-91	[8..360]	[47..399]
FTSW_IDILO - Putative lipid II flippase FtsW OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) G...	1.0E-90	[2..362]	[35..396]
gi\|145223574, gi... - gi\|89339016\|ref\|ZP_01191781.1\| Cell cycle protein [Mycobacterium flavescens PYR-GCK], gi\|89320949\|gb...	3.0E-90	[8..360]	[55..407]

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Predicted Domain #1

Region A:
Residues: [1-158]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTPDFILI IVTLALLTIG MIMVYSASAV WASYKMGDSF FFAKRQLLFA GLGVVAMFFI  60
   61 MKIDYWVWRT YSKVILLVCF ILLILVLIPG VGLVRGGARS WIGIGAFSIQ PSEFMKFAMI 120
  121 IFLAKFLAER QKLITSFKRG LLPALGFVFL AFGMIMLQ

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [159-244]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDLGTGTVMV GTCIIMIFIS GARVFHFAMF GLLGVAGFVG LIASAPYRMK RITSYLDPWS  60
   61 DPLGSGFQII QSLLAIGPGG LFGLGL

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [245-295]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GQSRQKFLYL PEPQTDFIFA ILSEELGFIG GSFVLLLFSL LLWRGIRIAL G

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4

Region A:
Residues: [296-363]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APDLYGTFLA VGIVAMIAIQ VMINVGVVTG LMPVTGITLP FLSYGGSSLT LMLMAVGVLL  60
   61 NISRHSRY

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits