YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258698, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	240 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258698, gi|....

Description	E-value	Query Range	Subject Range
DAPH_BACCN - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase OS=Bacillus cytotoxicus (strain DSM...	5.0E-47	[1..240]	[1..240]
gi\|89085984, gi\|... - gi\|89099375\|ref\|ZP_01172252.1\| YkuQ [Bacillus sp. NRRL B-14911], gi\|89085984\|gb\|EAR65108.1\| YkuQ [Ba...	1.0E-43	[1..236]	[1..236]
DAPH_LISIV - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase OS=Listeria ivanovii GN=dapH PE=3 S...	4.0E-43	[1..236]	[1..236]
DAPH_OCEIH - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase OS=Oceanobacillus iheyensis GN=dapH... DAPH_OCEIH - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase OS=Oceanobacillus iheyensis (strain...	6.0E-43	[3..237]	[1..235]
gi\|228850096, gi... - gi\|228909807\|ref\|ZP_04073630.1\| Tetrahydrodipicolinate succinylase [Bacillus thuringiensis IBL 200],... DAPH_BACC4 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase OS=Bacillus cereus (strain B4264) G... gi\|228799419, gi... - gi\|228960244\|ref\|ZP_04121900.1\| Tetrahydrodipicolinate succinylase [Bacillus thuringiensis serovar p... DAPH_BACCR - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase OS=Bacillus cereus (strain ATCC 145... DAPH_BACC2 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase OS=Bacillus cereus (strain G9842) G... gi\|228805385, gi... - gi\|228954257\|ref\|ZP_04116284.1\| Tetrahydrodipicolinate succinylase [Bacillus thuringiensis serovar k... gi\|228941142, gi... - gi\|228941142\|ref\|ZP_04103697.1\| Tetrahydrodipicolinate succinylase [Bacillus thuringiensis serovar b... gi\|206733908, gi... - gi\|206971136\|ref\|ZP_03232087.1\| putative 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfer... gi\|228922732, gi... - gi\|228922732\|ref\|ZP_04086030.1\| Tetrahydrodipicolinate succinylase [Bacillus thuringiensis serovar h... gi\|228711652, gi... - gi\|229071482\|ref\|ZP_04204703.1\| Tetrahydrodipicolinate succinylase [Bacillus cereus F65185], gi\|2287... gi\|229047668, gi... - gi\|229047668\|ref\|ZP_04193254.1\| Tetrahydrodipicolinate succinylase [Bacillus cereus AH676], gi\|22872... gi\|228779071, gi... - gi\|228980667\|ref\|ZP_04140974.1\| Tetrahydrodipicolinate succinylase [Bacillus thuringiensis Bt407], g... gi\|228974074, gi... - gi\|228974074\|ref\|ZP_04134646.1\| Tetrahydrodipicolinate succinylase [Bacillus thuringiensis serovar t... gi\|229146553, gi... - gi\|229146553\|ref\|ZP_04274923.1\| Tetrahydrodipicolinate succinylase [Bacillus cereus BDRD-ST24], gi\|2... gi\|228654185, gi... - gi\|229129259\|ref\|ZP_04258231.1\| Tetrahydrodipicolinate succinylase [Bacillus cereus BDRD-Cer4], gi\|2... gi\|228671835, gi... - gi\|229111453\|ref\|ZP_04241004.1\| Tetrahydrodipicolinate succinylase [Bacillus cereus Rock1-15], gi\|22... gi\|229081233, gi... - gi\|229081233\|ref\|ZP_04213742.1\| Tetrahydrodipicolinate succinylase [Bacillus cereus Rock4-2], gi\|228... gi\|229192189, gi... - gi\|229192189\|ref\|ZP_04319156.1\| Tetrahydrodipicolinate succinylase [Bacillus cereus ATCC 10876], gi\|... gi\|229180256, gi... - gi\|229180256\|ref\|ZP_04307600.1\| Tetrahydrodipicolinate succinylase [Bacillus cereus 172560W], gi\|228... gi\|228620797, gi... - gi\|229162915\|ref\|ZP_04290872.1\| Tetrahydrodipicolinate succinylase [Bacillus cereus R309803], gi\|228... gi\|228631143, gi... - gi\|229152181\|ref\|ZP_04280374.1\| Tetrahydrodipicolinate succinylase [Bacillus cereus m1550], gi\|22863...	2.0E-42	[1..240]	[1..240]
gi\|228717655, gi... - gi\|229061648\|ref\|ZP_04198987.1\| Tetrahydrodipicolinate succinylase [Bacillus cereus AH603], gi\|22871... gi\|228614734, gi... - gi\|229168722\|ref\|ZP_04296443.1\| Tetrahydrodipicolinate succinylase [Bacillus cereus AH621], gi\|22861... gi\|229134790, gi... - gi\|229134790\|ref\|ZP_04263598.1\| Tetrahydrodipicolinate succinylase [Bacillus cereus BDRD-ST196], gi\|... DAPH_BACWK - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase OS=Bacillus weihenstephanensis (str...	2.0E-42	[1..240]	[1..240]
gi\|74489009, gi\|... - gi\|75763501\|ref\|ZP_00743216.1\| Tetrahydrodipicolinate N-acetyltransferase [Bacillus thuringiensis se... gi\|228857231, gi... - gi\|228902487\|ref\|ZP_04066641.1\| Tetrahydrodipicolinate succinylase [Bacillus thuringiensis IBL 4222]...	3.0E-42	[1..240]	[1..240]
gi\|16078482, gi\|... - gi\|2633789\|emb\|CAB13291.1\| ykuQ [Bacillus subtilis subsp. subtilis str. 168], gi\|16078482\|ref\|NP_389... gi\|7475869, gi\|8... - gi\|81556009\|sp\|O34981.1\|DAPH_BACSU RecName: Full=2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acet...	1.0E-41	[1..236]	[1..236]
gi\|133733271, gi... - gi\|254936022\|ref\|ZP_05267719.1\| hypothetical protein LmonF6_02785 [Listeria monocytogenes F6900], gi... DAPH_LISMO - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase OS=Listeria monocytogenes GN=dapH P... gi\|224500743 - gi\|224500743\|ref\|ZP_03669092.1\| hypothetical protein LmonF1_14141 [Listeria monocytogenes Finland 19... gi\|224502674 - gi\|224502674\|ref\|ZP_03670981.1\| hypothetical protein LmonFR_09164 [Listeria monocytogenes FSL R2-561... gi\|255016843 - gi\|255016843\|ref\|ZP_05288969.1\| hypothetical protein LmonF_01451 [Listeria monocytogenes FSL F2-515] gi\|255027624 - gi\|255027624\|ref\|ZP_05299610.1\| hypothetical protein LmonocytFSL_16987 [Listeria monocytogenes FSL J... gi\|153185853, gi... - gi\|254898815\|ref\|ZP_05258739.1\| hypothetical protein LmonJ_03340 [Listeria monocytogenes J0161], gi\|... gi\|127633012, gi... - gi\|254832243\|ref\|ZP_05236898.1\| hypothetical protein Lmon1_12894 [Listeria monocytogenes 10403S], gi... gi\|47096343, gi\|... - gi\|47096343\|ref\|ZP_00233939.1\| 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putat... gi\|127766099, gi... - gi\|254911696\|ref\|ZP_05261708.1\| hypothetical protein LmonJ2_02780 [Listeria monocytogenes J2818], gi... DAPH_LISMO - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase OS=Listeria monocytogenes serovar 1... gi\|254827956, gi... - gi\|254827956\|ref\|ZP_05232643.1\| hypothetical protein LmonocytogeFSL_05800 [Listeria monocytogenes FS...	4.0E-41	[1..236]	[1..236]
gi\|254872946 - gi\|254872946\|ref\|ZP_05245656.1\| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [... DAPH_LISMH - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase OS=Listeria monocytogenes serotype ... DAPH_LISW6 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase OS=Listeria welshimeri serovar 6b (... DAPH_LISIN - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase OS=Listeria innocua serovar 6a (str... DAPH_LISIN - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase OS=Listeria innocua GN=dapH PE=3 SV...	7.0E-41	[1..236]	[1..236]

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Predicted Domain #1

Region A:
Residues: [1-240]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMMDANEII SFIQKSEKKT PVKVYIKGDL KEVTFPETVQ AFVNKKSGVL FGEWSEIKTI  60
   61 LDENSKYIVD YVVENDRRNS AIPMLDLKGI KARIEPGAII RDHVEIGDNA VIMMNATINI 120
  121 GAVIGEGSMI DMNAVLGGRA TVGKNCHVGA GAVLAGVIEP PSAKPVIVED DVVIGANVVV 180
  181 LEGVTVGKGA VVAAGAVVTE DVPPYTVVAG TPARVIKEID EKTKAKTEIK QELRQLNPEK 240
  241

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	33.522879
Match:	1hv9A
Description:	N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain; N-acetylglucosamine 1-phosphate uridyltransferase GlmU, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	2.59855937987599	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	2.00406253837813	bayes_pls_golite062009
acyltransferase activity	1.97801068671318	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.94103020303346	bayes_pls_golite062009
transferase activity	1.3237300007392	bayes_pls_golite062009
O-acyltransferase activity	1.15494456676161	bayes_pls_golite062009
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity	0.94437024014042	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: