YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30264312, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	151 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264312, gi|....

Description	E-value	Query Range	Subject Range
gi\|225866223, gi... - gi\|225866223\|ref\|YP_002751601.1\| comG operon protein 4 [Bacillus cereus 03BB102], gi\|225788710\|gb\|AC... gi\|196046315, gi... - gi\|196046315\|ref\|ZP_03113541.1\| comG operon protein 4 [Bacillus cereus 03BB108], gi\|196022785\|gb\|EDX... gi\|49480951, gi\|... - gi\|49480951\|ref\|YP_038301.1\| comG operon protein 4 [Bacillus thuringiensis serovar konkukian str. 97...	7.0E-37	[1..151]	[1..151]
gi\|42783364, gi\|... - gi\|42783364\|ref\|NP_980611.1\| comG operon protein 4 [Bacillus cereus ATCC 10987], gi\|42739292\|gb\|AAS4...	1.0E-36	[1..151]	[1..151]
gi\|47555475, gi\|... - gi\|47567798\|ref\|ZP_00238506.1\| ComG operon protein 4 [Bacillus cereus G9241], gi\|47555475\|gb\|EAL1381...	8.0E-36	[1..151]	[1..151]
gi\|29897876, gi\|... - gi\|30022319\|ref\|NP_833950.1\| comG operon protein 4 [Bacillus cereus ATCC 14579], gi\|29897876\|gb\|AAP1...	2.0E-35	[1..151]	[1..151]
gi\|74491588, gi\|... - gi\|75760918\|ref\|ZP_00740928.1\| ComG operon protein 4 [Bacillus thuringiensis serovar israelensis ATC...	1.0E-34	[1..151]	[1..151]
gi\|89153493, gi\|... - gi\|89208586\|ref\|ZP_01187085.1\| Prokaryotic N-terminal methylation site [Bacillus weihenstephanensis ...	1.0E-33	[1..151]	[1..151]
gi\|89149605, gi\|... - gi\|89202396\|ref\|ZP_01181121.1\| hypothetical protein Bcer98DRAFT_1248 [Bacillus cereus subsp. cytotox...	1.0E-30	[1..149]	[1..149]
gi\|52786383, gi\|... - gi\|52786383\|ref\|YP_092212.1\| ComGD [Bacillus licheniformis ATCC 14580], gi\|52348885\|gb\|AAU41519.1\| C... gi\|18266373 - gi\|18266373\|gb\|AAL67532.1\|AF459917_4 late competence protein ComGD [Bacillus licheniformis]	3.0E-23	[1..143]	[1..144]
gi\|17130855, gi\|... - gi\|17229257\|ref\|NP_485805.1\| hypothetical protein all1765 [Nostoc sp. PCC 7120], gi\|17130855\|dbj\|BAB... gi\|25533714 - pir\|\|AG2026 hypothetical protein all1765 [imported] - Nostoc sp. (strain PCC 7120)	6.0E-23	[2..151]	[17..180]
gi\|75700221, gi\|... - gi\|75906496\|ref\|YP_320792.1\| hypothetical protein Ava_0271 [Anabaena variabilis ATCC 29413], gi\|7570...	8.0E-23	[3..151]	[18..180]

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Predicted Domain #1

Region A:
Residues: [1-151]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQKGFTLLE MLLVLFAISV LSMVTYFNVH SLYEKQKIEQ FLRQFSNDIL YMQQLAINRQ  60
   61 KHYTLRWHKD RHMYYIGESS TDLSIIKREY DSDIQLDLNT FPNPMTYNPS GNINRGGTIL 120
  121 LSYRSYKYEI VFQLGRGRFT YREMSKRVSD G

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	19.69897
Match:	1ay2A
Description:	STRUCTURE OF THE FIBER-FORMING PROTEIN PILIN AT 2.6 ANGSTROMS RESOLUTION
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits