YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30259033, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	319 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259033, gi|....

Description	E-value	Query Range	Subject Range
gi\|47567869, gi\|... - gi\|47567869\|ref\|ZP_00238577.1\| PhoH protein [Bacillus cereus G9241], gi\|47555546\|gb\|EAL13889.1\| PhoH...	0.0	[1..319]	[1..319]
gi\|221241808, gi... - gi\|222097750\|ref\|YP_002531807.1\| PhoH family protein [Bacillus cereus Q1], gi\|221241808\|gb\|ACM14518.... gi\|217961795, gi... - gi\|217961795\|ref\|YP_002340365.1\| PhoH family protein [Bacillus cereus AH187], gi\|217065517\|gb\|ACJ797... gi\|229198431, gi... - gi\|229198431\|ref\|ZP_04325137.1\| hypothetical protein bcere0001_39610 [Bacillus cereus m1293], gi\|228... gi\|206978419, gi... - gi\|206978419\|ref\|ZP_03239288.1\| PhoH family protein [Bacillus cereus H3081.97], gi\|206743375\|gb\|EDZ5... gi\|228642476, gi... - gi\|229141043\|ref\|ZP_04269586.1\| hypothetical protein bcere0013_41370 [Bacillus cereus BDRD-ST26], gi... gi\|42739360, gi\|... - gi\|42783431\|ref\|NP_980678.1\| PhoH family protein [Bacillus cereus ATCC 10987], gi\|42739360\|gb\|AAS432...	0.0	[1..319]	[1..319]
gi\|21402352, gi\|... - gi\|65321678\|ref\|ZP_00394637.1\| COG1702: Phosphate starvation-inducible protein PhoH, predicted ATPas...	0.0	[1..319]	[1..319]
gi\|89150197, gi\|... - gi\|89201819\|ref\|ZP_01180554.1\| PhoH-like protein:KH, type 1 [Bacillus cereus subsp. cytotoxis NVH 39...	0.0	[1..319]	[1..319]
gi\|75762400, gi\|... - gi\|75762400\|ref\|ZP_00742271.1\| PhoH protein [Bacillus thuringiensis serovar israelensis ATCC 35646],... gi\|218544469, gi... - gi\|218899471\|ref\|YP_002447882.1\| PhoH family protein [Bacillus cereus G9842], gi\|218544469\|gb\|ACK968... gi\|228856837, gi... - gi\|228902828\|ref\|ZP_04066973.1\| hypothetical protein bthur0014_39990 [Bacillus thuringiensis IBL 422... gi\|228910139, gi... - gi\|228910139\|ref\|ZP_04073959.1\| hypothetical protein bthur0013_42880 [Bacillus thuringiensis IBL 200...	0.0	[1..319]	[1..319]
gi\|218160216, gi... - gi\|218232259\|ref\|YP_002369112.1\| PhoH family protein [Bacillus cereus B4264], gi\|218160216\|gb\|ACK602... gi\|228631113, gi... - gi\|229152505\|ref\|ZP_04280697.1\| hypothetical protein bcere0011_40430 [Bacillus cereus m1550], gi\|228... gi\|229146890, gi... - gi\|229146890\|ref\|ZP_04275255.1\| hypothetical protein bcere0012_40300 [Bacillus cereus BDRD-ST24], gi... gi\|228653899, gi... - gi\|229129582\|ref\|ZP_04258552.1\| hypothetical protein bcere0015_40250 [Bacillus cereus BDRD-Cer4], gi... gi\|228671772, gi... - gi\|229111778\|ref\|ZP_04241326.1\| hypothetical protein bcere0018_40230 [Bacillus cereus Rock1-15], gi\|... gi\|29897941, gi\|... - gi\|30022383\|ref\|NP_834014.1\| PhoH family protein [Bacillus cereus ATCC 14579], gi\|29897941\|gb\|AAP112... gi\|228723481, gi... - gi\|229048024\|ref\|ZP_04193600.1\| hypothetical protein bcere0027_39990 [Bacillus cereus AH676], gi\|228... gi\|228799170, gi... - gi\|228960570\|ref\|ZP_04122219.1\| hypothetical protein bthur0005_40360 [Bacillus thuringiensis serovar...	0.0	[1..319]	[1..319]
gi\|229135130, gi... - gi\|229135130\|ref\|ZP_04263932.1\| hypothetical protein bcere0014_40330 [Bacillus cereus BDRD-ST196], g... gi\|228747762, gi... - gi\|229013525\|ref\|ZP_04170659.1\| hypothetical protein bmyco0001_39350 [Bacillus mycoides DSM 2048], g... gi\|228614462, gi... - gi\|229169053\|ref\|ZP_04296769.1\| hypothetical protein bcere0007_40050 [Bacillus cereus AH621], gi\|228... gi\|163942061, gi... - gi\|89208398\|ref\|ZP_01186907.1\| PhoH-like protein [Bacillus weihenstephanensis KBAB4], gi\|89153671\|gb...	0.0	[1..319]	[1..319]
gi\|152987458, gi... - gi\|94417082\|ref\|ZP_01296904.1\| hypothetical protein PaerP_01001278 [Pseudomonas aeruginosa PA7], gi\|...	0.0	[3..319]	[5..319]
gi\|15599176, gi\|... - gi\|9950172\|gb\|AAG07368.1\|AE004816_4 conserved hypothetical protein [Pseudomonas aeruginosa PAO1], gi... gi\|107103499 - gi\|107103499\|ref\|ZP_01367417.1\| hypothetical protein PaerPA_01004569 [Pseudomonas aeruginosa PACS2] gi\|11348123 - pir\|\|G83147 conserved hypothetical protein PA3981 [imported] - Pseudomonas aeruginosa (strain PAO1)	0.0	[3..319]	[5..319]
gi\|126196045, gi... - gi\|84325115\|ref\|ZP_00973155.1\| COG1702: Phosphate starvation-inducible protein PhoH, predicted ATPas... gi\|218889736, gi... - gi\|218889736\|ref\|YP_002438600.1\| PhoH family protein [Pseudomonas aeruginosa LESB58], gi\|218769959\|e... gi\|115587241, gi... - gi\|46164599\|ref\|ZP_00205116.1\| COG1702: Phosphate starvation-inducible protein PhoH, predicted ATPas...	0.0	[3..319]	[5..319]

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Predicted Domain #1

Region A:
Residues: [1-319]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEQLVEMNQ QLENTNEAIA LFGVNDAHLK VIERELNVSI ITRGETVHVS GAVETVTLVE  60
   61 KILQQLLVVI RKGVSITERD VAYAIQLAQQ GKIAQFEELY EEEIFKTAKG KSIRVKTMGQ 120
  121 RRYIHAMKKN DIVFGIGPAG TGKTYLAVVM AVRALKQGYV KKIILTRPAV EAGESLGFLP 180
  181 GDLKEKVDPY LRPLYDALHD ILGQEYTQRM MERGVIEIAP LAYMRGRTLD DSFVILDEAQ 240
  241 NTTGAQIKMF LTRLGFSSKM VITGDPSQVD LPKGVKSGLT LASNILSGVS GLSFITLEQT 300
  301 DVVRHPLVQR IIEAYDKME

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	3.75
Match:	1w36D
Description:	RecBCD:DNA complex
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.31308081280876	bayes_pls_golite062009
binding	1.01787678195047	bayes_pls_golite062009
hydrolase activity	0.839181738858872	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: