YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30264416, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	207 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264416, gi|....

Description	E-value	Query Range	Subject Range
gi\|229133906, gi... - gi\|229133906\|ref\|ZP_04262729.1\| Nitroreductase [Bacillus cereus BDRD-ST196], gi\|228649607\|gb\|EEL0561... gi\|163940766, gi... - gi\|89207146\|ref\|ZP_01185693.1\| Nitroreductase [Bacillus weihenstephanensis KBAB4], gi\|89154931\|gb\|EA...	1.0E-43	[2..204]	[9..211]
gi\|42782131, gi\|... - gi\|42782131\|ref\|NP_979378.1\| nitroreductase family protein [Bacillus cereus ATCC 10987], gi\|42738055...	2.0E-43	[2..204]	[9..211]
gi\|228825463, gi... - gi\|228934295\|ref\|ZP_04097134.1\| Nitroreductase [Bacillus thuringiensis serovar andalousiensis BGSC 4... gi\|196032437, gi... - gi\|196032437\|ref\|ZP_03099851.1\| nitroreductase family protein [Bacillus cereus W], gi\|195995188\|gb\|E... gi\|49480049, gi\|... - gi\|49480049\|ref\|YP_037122.1\| NAD(P)H nitroreductase [Bacillus thuringiensis serovar konkukian str. 9...	2.0E-43	[2..204]	[9..211]
gi\|52142481, gi\|... - gi\|52142481\|ref\|YP_084348.1\| NAD(P)H nitroreductase [Bacillus cereus E33L], gi\|51975950\|gb\|AAU17500....	2.0E-43	[2..204]	[9..211]
gi\|29896692, gi\|... - gi\|30021139\|ref\|NP_832770.1\| NAD(P)H nitroreductase [Bacillus cereus ATCC 14579], gi\|29896692\|gb\|AAP... gi\|228637878, gi... - gi\|229145632\|ref\|ZP_04274015.1\| Nitroreductase [Bacillus cereus BDRD-ST24], gi\|228637878\|gb\|EEK94325... gi\|228655222, gi... - gi\|229128363\|ref\|ZP_04257344.1\| Nitroreductase [Bacillus cereus BDRD-Cer4], gi\|228655222\|gb\|EEL11079... gi\|228672973, gi... - gi\|229110489\|ref\|ZP_04240059.1\| Nitroreductase [Bacillus cereus Rock1-15], gi\|228672973\|gb\|EEL28247....	2.0E-43	[2..204]	[9..211]
gi\|47568619, gi\|... - gi\|47568619\|ref\|ZP_00239317.1\| nitroreductase family protein [Bacillus cereus G9241], gi\|47554715\|gb...	4.0E-43	[2..204]	[9..211]
gi\|75761268, gi\|... - gi\|75761268\|ref\|ZP_00741250.1\| NAD(P)H-dependent quinone reductase [Bacillus thuringiensis serovar i... gi\|228902870, gi... - gi\|228902870\|ref\|ZP_04067012.1\| NADPH nitroreductase ydfN [Bacillus thuringiensis IBL 4222], gi\|2288... gi\|218541934, gi... - gi\|218899511\|ref\|YP_002447922.1\| nitroreductase family protein [Bacillus cereus G9842], gi\|218541934...	1.0E-42	[2..207]	[3..208]
gi\|91709476, gi\|... - gi\|91775489\|ref\|YP_545245.1\| nitroreductase [Methylobacillus flagellatus KT], gi\|91709476\|gb\|ABE4940...	3.0E-42	[1..207]	[1..200]

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Predicted Domain #1

Region A:
Residues: [1-207]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFEELAIAR RSAMKFVQGI EIPDEDFKKI FELTKLSPSC YNLQHTHYVV IRDQERKERL  60
   61 KELAFGQYKV SSASAVILVC GDKRAYQNVE NIYFGMKVLK MIDECEYEDT IKQTKGLYEG 120
  121 KGERFMEEEA IRNASLSAMT FMYAAKYYGY DTCPMIGFDE KAVQSELNMP EHVVPVLMIT 180
  181 IGKSDTTKTR PRGYRKPISE FVTYETF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	35.0
Match:	2b67A
Description:	Crystal structure of the Nitroreductase Family Protein from Streptococcus pneumoniae TIGR4
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.48193963005483	bayes_pls_golite062009
oxidoreductase activity	0.480695441264854	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: