YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30259101, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	307 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259101, gi|....

Description	E-value	Query Range	Subject Range
gi\|75910354, gi\|... - gi\|75910354\|ref\|YP_324650.1\| cystathionine beta-synthase [Anabaena variabilis ATCC 29413], gi\|757040...	1.0E-92	[1..306]	[1..309]
gi\|20517485, gi\|... - gi\|20808833\|ref\|NP_624004.1\| cysteine synthase [Thermoanaerobacter tengcongensis MB4], gi\|20517485\|g... gi\|20808833 - gi\|20808833\|ref\|NP_624004.1\| Cysteine synthase [Thermoanaerobacter tengcongensis MB4]	4.0E-91	[2..299]	[7..305]
gi\|166854037, gi... - gi\|167039797\|ref\|YP_001662782.1\| cysteine synthase A [Thermoanaerobacter sp. X514], gi\|166854037\|gb\|...	1.0E-90	[3..299]	[8..305]
gi\|242258636, gi... - gi\|242258636\|ref\|ZP_04803398.1\| cysteine synthase A [Thermoanaerobacter sp. X513], gi\|242229842\|gb\|E... gi\|166855540, gi... - gi\|76796109\|ref\|ZP_00778477.1\| Cysteine synthase K/M:Cysteine synthase A [Thermoanaerobacter ethanol... gi\|167039426, gi... - gi\|167039426\|ref\|YP_001662411.1\| cysteine synthase A [Thermoanaerobacter sp. X514], gi\|166853666\|gb\|... gi\|241903580, gi... - gi\|241903580\|ref\|ZP_04788302.1\| cysteine synthase A [Thermoanaerobacter brockii subsp. finnii Ako-1]...	5.0E-90	[2..299]	[7..305]
gi\|67850867, gi\|... - gi\|67874931\|ref\|ZP_00504482.1\| Cysteine synthase K/M:Cysteine synthase K [Clostridium thermocellum A... gi\|196252125, gi... - gi\|196252125\|ref\|ZP_03150787.1\| cysteine synthase A [Clostridium thermocellum DSM 4150], gi\|19619839...	6.0E-90	[2..305]	[3..310]
gi\|70727496, gi\|... - gi\|70727496\|ref\|YP_254412.1\| cysteine synthase [Staphylococcus haemolyticus JCSC1435], gi\|68448222\|d... gi\|228476212, gi... - gi\|228476212\|ref\|ZP_04060915.1\| cysteine synthase A [Staphylococcus hominis SK119], gi\|228269697\|gb\|...	5.0E-89	[5..303]	[7..306]
gi\|73663552, gi\|... - gi\|73663552\|ref\|YP_302333.1\| cysteine synthase [Staphylococcus saprophyticus subsp. saprophyticus AT...	9.0E-89	[5..303]	[7..306]
gi\|251806688, gi... - gi\|251809820\|ref\|ZP_04824293.1\| cysteine synthase [Staphylococcus epidermidis BCM-HMP0060], gi\|25180... gi\|242241598, gi... - gi\|242241598\|ref\|ZP_04796043.1\| cysteine synthase [Staphylococcus epidermidis W23144], gi\|242234979\|... CYSK_STAEQ - Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=cysK PE=3 SV=1 CYSK_STAEP - (Q8CMT6) Cysteine synthase (EC 2.5.1.47) (O-acetylserine sulfhydrylase) (O-acetylserine (Thiol)-lyas... CYSK_STAES - Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=cysK PE=3 SV=1	1.0E-88	[7..303]	[9..306]
gi\|227247508, gi... - gi\|227556072\|ref\|ZP_03986119.1\| cysteine synthase (o-acetylserine sulfhydrylase) family protein [Sta... gi\|269202133\|ref... - cysteine synthase [Staphylococcus aureus subsp. aureus ED98] gi\|253315218 - gi\|253315218\|ref\|ZP_04838431.1\| cysteine synthase A [Staphylococcus aureus subsp. aureus str. CF-Mar... gi\|253730981, gi... - gi\|253730981\|ref\|ZP_04865146.1\| cysteine synthase (o-acetylserine sulfhydrylase) family protein [Sta... gi\|227900600, gi... - gi\|227900600\|ref\|ZP_04018405.1\| cysteine synthase (o-acetylserine sulfhydrylase) family protein [Sta... gi\|251804219, gi... - gi\|251812231\|ref\|ZP_04826704.1\| cysteine synthase (o-acetylserine sulfhydrylase) family protein [Sta... gi\|25291764 - pir\|\|B89818 cysteine synthase (EC 4.2.99.8) [similarity] - Staphylococcus aureus (strain N315) gi\|151220687, gi... - gi\|151220687\|ref\|YP_001331509.1\| cysteine synthase-like protein [Staphylococcus aureus subsp. aureus... CYSK_STAAR - Cysteine synthase OS=Staphylococcus aureus (strain MRSA252) GN=cysK PE=3 SV=1 gi\|87201831, gi\|... - gi\|88194273\|ref\|YP_499065.1\| hypothetical protein SAOUHSC_00488 [Staphylococcus aureus subsp. aureus... gi\|253735248, gi... - gi\|253735248\|ref\|ZP_04869413.1\| cysteine synthase (o-acetylserine sulfhydrylase) family protein [Sta... CYSK_STAAW - Cysteine synthase OS=Staphylococcus aureus (strain MW2) GN=cysK PE=3 SV=1 gi\|87126032, gi\|... - gi\|87160058\|ref\|YP_493200.1\| cysteine synthase A [Staphylococcus aureus subsp. aureus USA300_FPR3757... gi\|255005306 - gi\|255005306\|ref\|ZP_05143907.2\| cysteine synthase A [Staphylococcus aureus subsp. aureus Mu50-omega] CYSK_STAAN - Cysteine synthase OS=Staphylococcus aureus (strain N315) GN=cysK PE=1 SV=1 CYSK_STAAM - Cysteine synthase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=cysK PE=3 SV=1 CYSK_STAAC - Cysteine synthase OS=Staphylococcus aureus (strain COL) GN=cysK PE=3 SV=1 CYSK_STAAS - Cysteine synthase OS=Staphylococcus aureus (strain MSSA476) GN=cysK PE=3 SV=1 gi\|156978841, gi... - gi\|156978841\|ref\|YP_001441100.1\| cysteine synthase #o-acetylserine sulfhydrylase homologue [Staphylo... gi\|161508753, gi... - gi\|161508753\|ref\|YP_001574412.1\| cysteine synthase [Staphylococcus aureus subsp. aureus USA300_TCH15... gi\|221142295 - gi\|221142295\|ref\|ZP_03566788.1\| cysteine synthase [Staphylococcus aureus subsp. aureus str. JKD6009] gi\|87126032\|gb\|A... - cysteine synthase A [Staphylococcus aureus subsp. aureus USA300], cysteine synthase A [Staphylococcu... gi\|221138562 - gi\|221138562\|ref\|ZP_03563364.1\| cysteine synthase [Staphylococcus aureus subsp. aureus str. JKD6008]	5.0E-88	[5..303]	[7..306]
gi\|147740041, gi... - gi\|90586966\|ref\|ZP_01242649.1\| Cysteine synthase K/M:Cysteine synthase A [Staphylococcus aureus subs... gi\|150393018, gi... - gi\|90584028\|ref\|ZP_01239774.1\| Cysteine synthase K/M:Cysteine synthase A [Staphylococcus aureus subs...	9.0E-88	[5..303]	[7..306]

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Predicted Domain #1

Region A:
Residues: [1-307]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVYRGVHEL IGHTPIVEIT RFSLPEGVRL FAKLEFYNPG GSVKDRLGRE LIEDALEKGL  60
   61 VTEGGTIIEP TAGNTGIGLA LAALQHDLRV IVCVPEKFSI EKQELMKALG ATVVHTPTEQ 120
  121 GMTGAIAKAK ELVNEIPNSY SPSQFANEAN PRAYFKTLGP ELWSALNGEI NIFVAGAGTG 180
  181 GTFMGTASYL KEKNIDIKTV IVEPEGSILN GGKAGSHETE GIGLEFIPPF LKTSYFDEIH 240
  241 TISDRNAFLR VKELAQKEGL LVGSSSGAAF HASLLEAEKA APGTNIVTIF PDSSERYLSK 300
  301 DIYKGWE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	87.09691
Match:	2q3bA
Description:	No description for 2q3bA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits