YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30259194, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	138 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259194, gi|....

Description	E-value	Query Range	Subject Range
gi\|46323482, gi\|... - gi\|67549357\|ref\|ZP_00427223.1\| OsmC-like protein [Burkholderia vietnamiensis G4], gi\|67529353\|gb\|EAM...	3.0E-39	[1..137]	[1..138]
gi\|74015002, gi\|... - gi\|74015002\|ref\|ZP_00685630.1\| OsmC-like protein [Burkholderia ambifaria AMMD], gi\|72611805\|gb\|EAO47... gi\|118695706, gi... - gi\|172062793\|ref\|YP_001810444.1\| OsmC family protein [Burkholderia ambifaria MC40-6], gi\|171995310\|g...	3.0E-39	[1..137]	[1..138]
gi\|194564571, gi... - gi\|84360368\|ref\|ZP_00985072.1\| COG1764: Predicted redox protein, regulator of disulfide bond formati...	1.0E-38	[1..137]	[1..138]
gi\|105896218, gi... - gi\|67656779\|ref\|ZP_00454160.1\| OsmC-like protein [Burkholderia cenocepacia AU 1054], gi\|67095496\|gb\|... gi\|84354127, gi\|... - gi\|84354127\|ref\|ZP_00979043.1\| COG1764: Predicted redox protein, regulator of disulfide bond formati... gi\|67665005, gi\|... - gi\|67665005\|ref\|ZP_00462273.1\| OsmC-like protein [Burkholderia cenocepacia HI2424], gi\|67101360\|gb\|E... gi\|118713549, gi... - gi\|170736045\|ref\|YP_001777305.1\| OsmC family protein [Burkholderia cenocepacia MC0-3], gi\|169818233\|...	1.0E-38	[1..137]	[1..138]
gi\|228747606, gi... - gi\|229013684\|ref\|ZP_04170813.1\| Organic hydroperoxide resistance protein [Bacillus mycoides DSM 2048... gi\|228614277, gi... - gi\|229169211\|ref\|ZP_04296925.1\| Organic hydroperoxide resistance protein [Bacillus cereus AH621], gi... gi\|89156752, gi\|... - gi\|89205268\|ref\|ZP_01183839.1\| OsmC-like protein [Bacillus weihenstephanensis KBAB4], gi\|89156752\|gb...	2.0E-38	[1..138]	[1..138]
gi\|115376751, gi... - gi\|115376751\|ref\|ZP_01463977.1\| organic hydroperoxide resistance protein [Stigmatella aurantiaca DW4...	1.0E-37	[4..137]	[32..165]
gi\|91777294, gi\|... - gi\|91777294\|ref\|YP_552502.1\| organic hydroperoxide resistance protein [Burkholderia xenovorans LB400...	1.0E-37	[1..137]	[1..138]
gi\|83848318, gi\|... - gi\|83858138\|ref\|ZP_00951665.1\| organic hydroperoxide resistance protein [Croceibacter atlanticus HTC...	1.0E-37	[1..137]	[1..137]
gi\|83944939, gi\|... - gi\|83944939\|ref\|ZP_00957305.1\| organic hydroperoxide resistance protein [Oceanicaulis alexandrii HTC...	2.0E-37	[1..137]	[1..138]
gi\|78063079, gi\|... - gi\|78063079\|ref\|YP_372987.1\| OsmC-like protein [Burkholderia sp. 383], gi\|77970964\|gb\|ABB12343.1\| Os...	2.0E-37	[1..137]	[1..138]

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Predicted Domain #1

Region A:
Residues: [1-138]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKLYTASVT ATGGRNGKVV SDDGILNLDV KMPKALGGAG GEATNPEQLF AAGYAACFDS  60
   61 ALQLVIRTKR VKVESTEVTA HVSIGKDTDG GFGLSAVLDV HVAGVSHSEA QELVEAAHGV 120
  121 CPYSKATRGN IEVTLNVR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.69897
Match:	1uspA
Description:	Organic Hydroperoxide Resistance Protein from Deinococcus radiodurans
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits