YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30264808, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	802 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264808, gi|....

Description	E-value	Query Range	Subject Range
gi\|228653462, gi... - gi\|229130018\|ref\|ZP_04258982.1\| Leucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4], gi\|228653462\|gb\|... SYL_BACCR - Leucine--tRNA ligase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / NCIMB ... gi\|229147309, gi... - gi\|229147309\|ref\|ZP_04275659.1\| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST24], gi\|228636141\|gb\|... gi\|228722903, gi... - gi\|229048442\|ref\|ZP_04194008.1\| Leucyl-tRNA synthetase [Bacillus cereus AH676], gi\|228722903\|gb\|EEL7... gi\|228671187, gi... - gi\|229112203\|ref\|ZP_04241743.1\| Leucyl-tRNA synthetase [Bacillus cereus Rock1-15], gi\|228671187\|gb\|E...	0.0	[1..802]	[1..802]
SYL_BACCN - Leucine--tRNA ligase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-98) G...	0.0	[1..802]	[1..802]
SYL_BACHK - Leucyl-tRNA synthetase OS=Bacillus thuringiensis subsp. konkukian GN=leuS PE=3 SV=1 SYL_BACHK - Leucine--tRNA ligase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=leuS PE=3 SV=1	0.0	[1..802]	[1..802]
gi\|47565165, gi\|... - gi\|47565165\|ref\|ZP_00236208.1\| leucyl-tRNA synthetase [Bacillus cereus G9241], gi\|47557951\|gb\|EAL162...	0.0	[1..802]	[1..802]
gi\|206977281, gi... - gi\|206977281\|ref\|ZP_03238178.1\| leucyl-tRNA synthetase [Bacillus cereus H3081.97], gi\|206744432\|gb\|E... SYL_BACC1 - Leucine--tRNA ligase OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=leuS PE=3 SV=1 gi\|229141476, gi... - gi\|229141476\|ref\|ZP_04270012.1\| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST26], gi\|228641961\|gb\|... gi\|228584607, gi... - gi\|229198904\|ref\|ZP_04325595.1\| Leucyl-tRNA synthetase [Bacillus cereus m1293], gi\|228584607\|gb\|EEK4... SYL_BACCQ - Leucine--tRNA ligase OS=Bacillus cereus (strain Q1) GN=leuS PE=3 SV=1 SYL_BACC7 - Leucine--tRNA ligase OS=Bacillus cereus (strain AH187) GN=leuS PE=3 SV=1	0.0	[1..802]	[1..802]
SYL_GEOKA - Leucine--tRNA ligase OS=Geobacillus kaustophilus (strain HTA426) GN=leuS PE=3 SV=1 SYL_GEOKA - Leucyl-tRNA synthetase OS=Geobacillus kaustophilus GN=leuS PE=3 SV=1	0.0	[1..802]	[1..805]
gi\|228791811, gi... - gi\|228967845\|ref\|ZP_04128857.1\| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str. T0... gi\|228903260, gi... - gi\|228903260\|ref\|ZP_04067392.1\| Leucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222], gi\|2288563... gi\|75763436, gi\|... - gi\|75763436\|ref\|ZP_00743161.1\| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis AT...	0.0	[1..802]	[1..802]
SYL_BACLD - Leucine--tRNA ligase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 /...	0.0	[1..802]	[1..804]
SYL_BACWK - Leucine--tRNA ligase OS=Bacillus weihenstephanensis (strain KBAB4) GN=leuS PE=3 SV=1	0.0	[1..802]	[1..802]
gi\|68196546, gi\|... - gi\|69244089\|ref\|ZP_00602625.1\| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [Enterococcu... gi\|48826444 - ref\|ZP_00287648.1\| COG0495: Leucyl-tRNA synthetase [Enterococcus faecium]	0.0	[1..802]	[1..804]

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Predicted Domain #1

Region A:
Residues: [1-802]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFNHQEIEK KWQGYWEENK TFRTPDETEK PKFYALDMFP YPSGAGLHVG HPEGYTATDI  60
   61 LSRMKRMQGY NVLHPMGWDA FGLPAEQYAL DTGNSPAEFT EHNINTFRNQ IKSLGFSYDW 120
  121 DREVNTTDPN YYKWTQWIFL KLFEKGLAYV DEVPVNWCPA LGTVLANEEI IDGKSERGGH 180
  181 PVERRPMRQW MLKITAYGDR LLEDLDELDW PESLKDMQRN WIGRSEGAEV HFNIDGTDEK 240
  241 FTVFTTRPDT LFGASYCVLA PEHALVADIT TADQKEAVEA YINSVKMKSD LERTELAKEK 300
  301 TGVFTGAYAV NPVNGEKLPI WIADYVLATY GTGAVMAVPA HDERDYEFAS TFNLPMKEVV 360
  361 KGGDITKEAY TGDGAHVNSA FLDGLNKEEA IAKMIEWLEV TSAGNQKVTY RLRDWLFSRQ 420
  421 RYWGEPIPVI HWEDGTMTAV KEEELPLVLP KTENIRPSGT GESPLANIDE WVNVVDPETG 480
  481 KKGRRETNTM PQWAGSCWYY LRYIDPNNSE ALVDPEKVKQ WLPVDIYIGG AEHAVLHLLY 540
  541 ARFWHKVLYD IGVVPTKEPF QQLFNQGMIL GENNEKMSKS KGNVVNPDDI VASHGADTLR 600
  601 LYEMFMGPLD ASIAWSENGL DGARRFLDRV WRLFVQDNGE LSEKITDAPN KDLEKAYHQT 660
  661 VKKVTEDYAE LRFNTAISQM MVFINDAYKA ETLPKEYVEG FVKMIAPVAP HIGEELWSKL 720
  721 GYNETITYAS WPTFDESKLV EDEVEIVVQV MGKVRAKLTM SKDASKDEME KLALEAIQDQ 780
  781 IEGKTVRKVI VVPGKLVNVV AN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	1000.0
Match:	1h3nA
Description:	Leucyl-tRNA synthetase (LeuRS)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits