YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30265330, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	502 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30265330, gi|....

Description	E-value	Query Range	Subject Range
ATPA_CARHZ - ATP synthase subunit alpha OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-...	0.0	[1..499]	[1..501]
gi\|33329385, gi\|... - gi\|33329385\|gb\|AAQ10088.1\| ATP synthase subunit alpha [Bacillus sp. TA2.A1], gi\|158430152\|pdb\|2QE7\|C...	0.0	[1..501]	[1..501]
ATPA_GEOKA - ATP synthase subunit alpha OS=Geobacillus kaustophilus (strain HTA426) GN=atpA PE=1 SV=1 gi\|229331215, gi... - gi\|229497789\|ref\|ZP_04391488.1\| ATP synthase F1, alpha subunit [Geobacillus sp. Y412MC52], gi\|229331... ATPA_GEOKA - ATP synthase subunit alpha OS=Geobacillus kaustophilus GN=atpA PE=3 SV=1 gi\|221087072, gi... - gi\|221087072\|ref\|ZP_03556612.1\| ATP synthase F1, alpha subunit [Geobacillus sp. Y412MC61], gi\|220709...	0.0	[1..502]	[1..502]
ATPA_BACHD - ATP synthase subunit alpha OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM... ATPA_BACHD - ATP synthase subunit alpha OS=Bacillus halodurans GN=atpA PE=3 SV=1	0.0	[1..502]	[1..502]
ATPA_SYMTH - ATP synthase subunit alpha OS=Symbiobacterium thermophilum (strain T / IAM 14863) GN=atpA PE=3 SV=1 ATPA_SYMTH - ATP synthase subunit alpha OS=Symbiobacterium thermophilum GN=atpA PE=3 SV=1	0.0	[1..498]	[1..498]
ATPA_BACPE - ATP synthase subunit alpha OS=Bacillus pseudofirmus (strain OF4) GN=atpA PE=3 SV=2 ATPA_BACPF - ATP synthase subunit alpha OS=Bacillus pseudofirmus GN=atpA PE=3 SV=2	0.0	[1..502]	[1..502]
ATPA_BACSU - ATP synthase subunit alpha OS=Bacillus subtilis GN=atpA PE=1 SV=3 gi\|221320882 - gi\|221320882\|ref\|ZP_03602176.1\| F0F1 ATP synthase subunit alpha [Bacillus subtilis subsp. subtilis s... gi\|221325167 - gi\|221325167\|ref\|ZP_03606461.1\| F0F1 ATP synthase subunit alpha [Bacillus subtilis subsp. subtilis s... ATPA_BACSU - ATP synthase subunit alpha OS=Bacillus subtilis (strain 168) GN=atpA PE=1 SV=3 gi\|221315971 - gi\|221315971\|ref\|ZP_03597776.1\| F0F1 ATP synthase subunit alpha [Bacillus subtilis subsp. subtilis s...	0.0	[1..501]	[1..501]
ATPA_BACCR - ATP synthase subunit alpha OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / NBRC 15305 / ... gi\|118419571, gi... - gi\|118480346\|ref\|YP_897497.1\| ATP synthase F1, alpha subunit [Bacillus thuringiensis str. Al Hakam],...	0.0	[1..502]	[4..505]
gi\|94495686, gi\|... - gi\|94495686\|ref\|ZP_01302266.1\| ATP synthase alpha subunit [Sphingomonas sp. SKA58], gi\|94425074\|gb\|E...	0.0	[1..499]	[1..509]
ATPA_BACSK - ATP synthase subunit alpha OS=Bacillus clausii (strain KSM-K16) GN=atpA PE=3 SV=1	0.0	[2..501]	[3..502]

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Predicted Domain #1

Region A:
Residues: [1-502]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIRAEEISA LIKQQIENYQ SEIEVSDVGT VIQVGDGIAR AHGLDNVMAG ELVEFSNGVM  60
   61 GLAQNLEENN VGIIILGPYT EIREGDEVRR TGRIMQVPVG KELIGRVVNP LGQPVDGLGP 120
  121 INTTNTRPIE SPAPGVMDRK SVHEPLQTGI KAIDALVPIG RGQRELIIGD RQTGKTAVAL 180
  181 DTIINQKDED MICIYVAIGQ KESTVRNVVE TLRKHGALEY TIVVTASASQ PAPLLYLAPY 240
  241 AGVTMGEEFM YNGKHVLVVY DDLSKQAAAY RELSLLLRRP PGREAYPGDV FYLHSRLLER 300
  301 AAKLSDAKGG GSLTALPFIE TQAGDVSAYI PTNVISITDG QIFLQSDLFF SGVRPAIDAG 360
  361 TSVSRVGGSA QIKAMSKVSG TLRLDLASYR ELEAFAQFGS DLDKATQAKL NRGARTVEVL 420
  421 KQGLHKPLRV EKQVIILYAL TRGFLDDIPV VDITRFEEEF HAWLDSNATD LLEEIRTTKK 480
  481 LADDDKFAAA INGFKKVFVA SE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	1000.0
Match:	2qe7A
Description:	No description for 2qe7A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits