YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260046, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	393 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260046, gi|....

Description	E-value	Query Range	Subject Range
gi\|115251727, gi... - gi\|126700290\|ref\|YP_001089187.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile 630], ...	0.0	[1..392]	[1..392]
gi\|90573693, gi\|... - gi\|90573693\|ref\|ZP_01230204.1\| hypothetical protein CdifQ_02002956 [Clostridium difficile QCD-32g58]... gi\|255518068 - gi\|255518068\|ref\|ZP_05385744.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile QCD-97b... gi\|255651184 - gi\|255651184\|ref\|ZP_05398086.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile QCD-37x... gi\|254976268 - gi\|254976268\|ref\|ZP_05272740.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile QCD-66c... gi\|255093654 - gi\|255093654\|ref\|ZP_05323132.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile CIP 107... gi\|255315403 - gi\|255315403\|ref\|ZP_05356986.1\| putative acetyl-CoA acetyltransferase [Clostridium difficile QCD-76w...	0.0	[1..392]	[1..392]
gi\|77996685, gi\|... - gi\|78044570\|ref\|YP_360188.1\| acetyl-CoA acetyltransferase [Carboxydothermus hydrogenoformans Z-2901]...	3.0E-99	[1..391]	[1..391]
gi\|13622708, gi\|... - gi\|15675510\|ref\|NP_269684.1\| putative acetyl-CoA:acetyltransferase [Streptococcus pyogenes M1 GAS], ... gi\|71853939, gi\|... - gi\|71911157\|ref\|YP_282707.1\| acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS5005], gi\|7185...	1.0E-98	[1..390]	[1..391]
gi\|56808066 - gi\|56808066\|ref\|ZP_00365862.1\| COG0183: Acetyl-CoA acetyltransferase [Streptococcus pyogenes M49 591... gi\|209540975, gi... - gi\|209559774\|ref\|YP_002286246.1\| Acetyl-CoA acetyltransferase [Streptococcus pyogenes NZ131], gi\|209...	2.0E-98	[1..390]	[1..391]
gi\|94544478, gi\|... - gi\|94990970\|ref\|YP_599070.1\| Acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS10270], gi\|945... gi\|71904047, gi\|... - gi\|71904047\|ref\|YP_280850.1\| acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS6180], gi\|7180...	3.0E-98	[1..390]	[1..391]
gi\|50914736, gi\|... - gi\|50914736\|ref\|YP_060708.1\| Acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS10394], gi\|509...	3.0E-98	[1..390]	[1..391]
gi\|94542477, gi\|... - gi\|94988969\|ref\|YP_597070.1\| acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS9429], gi\|9454... gi\|94992862, gi\|... - gi\|94992862\|ref\|YP_600961.1\| Acetyl-CoA acetyltransferase [Streptococcus pyogenes MGAS2096], gi\|9454...	4.0E-98	[1..390]	[1..391]
gi\|28895396, gi\|... - gi\|28895396\|ref\|NP_801746.1\| putative acetyl-CoA acetyltransferase [Streptococcus pyogenes SSI-1], g... gi\|21905120, gi\|... - gi\|21910914\|ref\|NP_665182.1\| putative acetyl-CoA:acetyltransferase [Streptococcus pyogenes MGAS315],...	1.0E-97	[1..390]	[1..391]
gi\|150015301, gi... - gi\|82747493\|ref\|ZP_00909989.1\| Thiolase [Clostridium beijerincki NCIMB 8052], gi\|82724578\|gb\|EAP5933...	2.0E-97	[1..392]	[1..392]

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Predicted Domain #1

Region A:
Residues: [1-393]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTVILSAA RTPVGKFGGS LKDVKATELG GIAIKAALER ANVSASDVEE VIFGTVIQGG  60
   61 QGQIPSRQAA RAAGIPWEVQ TETVNKVCAS GLRAVTLADQ IIRTGDQSLI VAGGMESMSN 120
  121 SPYILRGARW GYRMGNNEVI DLNVADGLTC AFSGIHMGVY GGEVAKEDGI SREAQDEWAY 180
  181 RSHQRAVSAH KEGRFEEEIV PVTIPQRKGD PIVVAKDEAP REDTTIEKLA KLKPVFDKTA 240
  241 TVTAGNAPGL NDGGAALVLM SEDRAKQEGR KPLATILAHT AIAVESKDFP RTPGYAINAL 300
  301 LEKTGKKIED IDLFEINEAF AAVAIASTEI AGIDPEKLNV NGGAVAMGHP IGASGARIIV 360
  361 TLIHALKQRG GGIGIASICS GGGQGDAVMI EVH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	84.221849
Match:	1wl4A
Description:	Human cytosolic acetoacetyl-CoA thiolase complexed with CoA
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits