YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|9107320, gi\|1...
Organism:	Xylella fastidiosa 9a5c
Length:	148 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9107320, gi|1....

Description	E-value	Query Range	Subject Range
gi\|71276305, gi\|... - gi\|71276305\|ref\|ZP_00652583.1\| Iojap-related protein [Xylella fastidiosa Dixon], gi\|71162913\|gb\|EAO1... gi\|170730506, gi... - gi\|170730506\|ref\|YP_001775939.1\| hypothetical protein Xfasm12_1380 [Xylella fastidiosa M12], gi\|1679... gi\|71729929, gi\|... - gi\|71900281\|ref\|ZP_00682417.1\| Iojap-related protein [Xylella fastidiosa Ann-1], gi\|71729929\|gb\|EAO3...	209.0	[0..1]	[148..1]
gi\|71731779, gi\|... - gi\|71898466\|ref\|ZP_00680638.1\| Iojap-related protein [Xylella fastidiosa Ann-1], gi\|71731779\|gb\|EAO3...	209.0	[0..1]	[148..1]
gi\|28199121, gi\|... - gi\|28199121\|ref\|NP_779435.1\| hypothetical protein PD1234 [Xylella fastidiosa Temecula1], gi\|28057219... gi\|182681848, gi... - gi\|182681848\|ref\|YP_001830008.1\| iojap-like protein [Xylella fastidiosa M23], gi\|182631958\|gb\|ACB927...	206.0	[0..1]	[148..1]
gi\|48728975, gi\|... - gi\|77461193\|ref\|YP_350700.1\| hypothetical protein Pfl01_4972 [Pseudomonas fluorescens Pf0-1], gi\|773...	167.0	[0..14]	[148..16]
gi\|71736823, gi\|... - gi\|71736823\|ref\|YP_276525.1\| iojap domain-containing protein [Pseudomonas syringae pv. phaseolicola ... gi\|237798406 - gi\|237798406\|ref\|ZP_04586867.1\| iojap domain-containing protein [Pseudomonas syringae pv. oryzae str... gi\|23470785, gi\|... - gi\|66047594\|ref\|YP_237435.1\| Iojap-related protein [Pseudomonas syringae pv. syringae B728a], gi\|632...	167.0	[0..23]	[148..1]
gi\|49074330 - gi\|49074330\|gb\|AAT49396.1\| PA4005 [synthetic construct]	164.0	[0..28]	[146..1]
gi\|150959030, gi... - gi\|94417062\|ref\|ZP_01296884.1\| hypothetical protein PaerP_01001258 [Pseudomonas aeruginosa PA7], gi\|...	164.0	[0..28]	[146..1]
gi\|113873620, gi... - gi\|150398208\|ref\|YP_001328675.1\| iojap-like protein [Sinorhizobium medicae WSM419], gi\|150029723\|gb\|...	164.0	[0..5]	[138..29]
gi\|15076189 - gi\|15076189\|emb\|CAC47742.1\| Hypothetical protein [Sinorhizobium meliloti 1021] gi\|15966916 - gi\|15966916\|ref\|NP_387269.1\| hypothetical protein SMc03780 [Sinorhizobium meliloti 1021]	164.0	[0..5]	[139..26]
gi\|11348130 - pir\|\|A83147 conserved hypothetical protein PA4005 [imported] - Pseudomonas aeruginosa (strain PAO1) gi\|126196067, gi... - gi\|84325137\|ref\|ZP_00973177.1\| COG0799: Uncharacterized homolog of plant Iojap protein [Pseudomonas ... IOJAP_PSEAB - Ribosomal silencing factor RsfS OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rsfS PE=1 SV=1 gi\|218889714, gi... - gi\|218889714\|ref\|YP_002438578.1\| hypothetical protein PLES_09711 [Pseudomonas aeruginosa LESB58], gi... gi\|15599200, gi\|... - gi\|9950197\|gb\|AAG07392.1\|AE004817_16 conserved hypothetical protein [Pseudomonas aeruginosa PAO1], g... gi\|107103520 - gi\|107103520\|ref\|ZP_01367438.1\| hypothetical protein PaerPA_01004590 [Pseudomonas aeruginosa PACS2] gi\|126168828, gi... - gi\|84319224\|ref\|ZP_00967625.1\| COG0799: Uncharacterized homolog of plant Iojap protein [Pseudomonas ...	164.0	[0..28]	[146..1]

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Predicted Domain #1

Region A:
Residues: [1-148]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPPTFTRVT TLTNQAHLIK TTIPNPPPSL PILLSTVHEA VETLKAKDIV KIDVRGKSSV  60
   61 ADYLVIASGT STRHVKSIAD EVVKFAKHLN IIPLGVEGKR EAEWVLIDLG NVIVHVMLPR 120
  121 VREFYALERL WSVGNQLTST ENADWEAP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	40.0
Match:	2o5aA
Description:	No description for 2o5aA was found.

Predicted functions:

Term	Confidence	Notes
transferase activity, transferring phosphorus-containing groups	0.123535769188618	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: