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View Structure Prediction Details

Protein: gi|33242320, gi|...
Organism: Chlamydophila pneumoniae TW-183
Length: 82 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|33242320, gi|....

Description E-value Query
Range
Subject
Range
RS18_CHLCV - 30S ribosomal protein S18 OS=Chlamydophila caviae (strain GPIC) GN=rpsR PE=3 SV=1
RS18_CHLCV - 30S ribosomal protein S18 OS=Chlamydophila caviae GN=rpsR PE=3 SV=1
108.0 [0..1] [82..1]
RS18_DEHM1 - 30S ribosomal protein S18 OS=Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195) GN=r...
108.0 [0..2] [81..8]
RS18_CHLFF - 30S ribosomal protein S18 OS=Chlamydia felis (strain Fe/C-56) GN=rpsR PE=3 SV=1
108.0 [0..1] [82..1]
RS18_BACCN - 30S ribosomal protein S18 OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-98 / NVH 391-...
107.0 [0..5] [81..1]
RS18_PSYA2 - 30S ribosomal protein S18 OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=rpsR PE=3 SV=1
RS18_PSYCK - 30S ribosomal protein S18 OS=Psychrobacter cryohalolentis (strain K5) GN=rpsR PE=3 SV=1
107.0 [0..11] [81..3]
RS18_PSYWF - 30S ribosomal protein S18 OS=Psychrobacter sp. (strain PRwf-1) GN=rpsR PE=3 SV=1
107.0 [0..11] [81..3]
RS18_KORVE - 30S ribosomal protein S18 OS=Koribacter versatilis (strain Ellin345) GN=rpsR PE=3 SV=1
106.0 [0..6] [78..47]
gi|228271886, gi... - gi|228474191|ref|ZP_04058928.1| ribosomal protein S18 [Staphylococcus hominis SK119], gi|228271886|g...
RS18_STAHJ - 30S ribosomal protein S18 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=rpsR PE=3 SV=1
106.0 [0..16] [82..13]
RS18_BACST - (P10806) 30S ribosomal protein S18 (BS21) (BS19)
106.0 [0..18] [82..13]
RS18_GEOKA - 30S ribosomal protein S18 OS=Geobacillus kaustophilus (strain HTA426) GN=rpsR PE=3 SV=1
gi|229497916, gi... - gi|229497916|ref|ZP_04391615.1| ribosomal protein S18 [Geobacillus sp. Y412MC52], gi|229331342|gb|EE...
gi|196249872, gi... - gi|196249872|ref|ZP_03148568.1| ribosomal protein S18 [Geobacillus sp. G11MC16], gi|196210748|gb|EDY...
gi|221086943, gi... - gi|221086943|ref|ZP_03556483.1| ribosomal protein S18 [Geobacillus sp. Y412MC61], gi|220708996|gb|EE...
RS18_GEOTN - 30S ribosomal protein S18 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rpsR PE=3 SV=2
RS18_GEOSE - 30S ribosomal protein S18 OS=Geobacillus stearothermophilus GN=rpsR PE=1 SV=2
RS18_GEOKA - 30S ribosomal protein S18 OS=Geobacillus kaustophilus GN=rpsR PE=3 SV=1
106.0 [0..18] [82..14]

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Predicted Domain #1
Region A:
Residues: [1-82]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKPVHNNEH RRKRFNKKCP FVSAGWKTID YKDVETLKKF ITERGKVLPR RITGVSSRFQ  60
   61 GVLSQAIKRA RHLGLLPFVG ED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.69897
Match: 1vs5R
Description: No description for 1vs5R was found.

YRC Informatics Platform - Version 3.0
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