YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|25521347, gi\|...
Organism:	Agrobacterium tumefaciens
Length:	206 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25521347, gi|....

Description	E-value	Query Range	Subject Range
gi\|116108080, gi... - gi\|116512426\|ref\|YP_809642.1\| spermidine acetyltransferase [Lactococcus lactis subsp. cremoris SK11]...	140.0	[0..27]	[202..1]
gi\|25303645 - pir\|\|G86826 diamine N-acetyltransferase (EC 2.3.1.57) [imported] - Lactococcus lactis subsp. lactis ... gi\|12724622, gi\|... - gi\|15673597\|ref\|NP_267771.1\| spermidine acetyltransferase [Lactococcus lactis subsp. lactis Il1403],...	139.0	[0..28]	[205..3]
gi\|52784100, gi\|... - gi\|52784100\|ref\|YP_089929.1\| YnaD [Bacillus licheniformis ATCC 14580], gi\|52346602\|gb\|AAU39236.1\| Yn...	136.0	[0..27]	[201..1]
gi\|46188084, gi\|... - gi\|66047660\|ref\|YP_237501.1\| GCN5-related N-acetyltransferase [Pseudomonas syringae pv. syringae B72...	136.0	[0..36]	[204..4]
YP20_BACLI - Uncharacterized N-acetyltransferase p20 OS=Bacillus licheniformis GN=p20 PE=3 SV=1	135.0	[0..27]	[201..1]
gi\|254703435 - gi\|254703435\|ref\|ZP_05165263.1\| phosphinothricin N-acetyltransferase [Brucella suis bv. 3 str. 686] gi\|23348505, gi\|... - gi\|23502509\|ref\|NP_698636.1\| acetyltransferase [Brucella suis 1330], gi\|23348505\|gb\|AAN30551.1\| acet... gi\|161619584, gi... - gi\|161619584\|ref\|YP_001593471.1\| phosphinothricin N-acetyltransferase [Brucella canis ATCC 23365], g...	134.0	[0..34]	[197..2]
gi\|91789290, gi\|... - gi\|91789290\|ref\|YP_550242.1\| GCN5-related N-acetyltransferase [Polaromonas sp. JS666], gi\|91698515\|g...	134.0	[0..22]	[204..12]
gi\|20516549, gi\|... - gi\|20807976\|ref\|NP_623147.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20516549\|g... gi\|20807976 - gi\|20807976\|ref\|NP_623147.1\| Acetyltransferase, including N-acetylase of ribosomal proteins [Thermoa...	134.0	[0..28]	[205..5]
gi\|25286364 - pir\|\|AE3299 phosphinothricin N-acetyltransferase (EC 2.3.1.-) [imported] - Brucella melitensis (stra... gi\|17986662, gi\|... - gi\|17986662\|ref\|NP_539296.1\| phosphinothricin N-acetyltransferase [Brucella melitensis 16M], gi\|1798...	134.0	[0..34]	[197..2]
gi\|113939208, gi... - gi\|159898951\|ref\|YP_001545198.1\| GCN5-related N-acetyltransferase [Herpetosiphon aurantiacus ATCC 23...	133.0	[0..29]	[204..1]

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Predicted Domain #1

Region A:
Residues: [1-206]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKTDNLYFG CAAMHNEGVN DPQDKRMTLS TVSSLLIRPC EEADIPAITE IYRDAVLHGR  60
   61 ASFEIDPPDV ATMAERRRLL VEGNYPYLVA EHDGKVAGYA YAGAYRARPA YGATVEDSVY 120
  121 IDPAMKGTGI GRKLLDALIA EATARGFRQM IAVIGDSANA ASVGVHRAAG FELVGTFKSI 180
  181 GWKHGQWLNT VLMQRALGEG DTTPRF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.69897
Match:	1yr0A
Description:	Crystal structure of phosphinothricin acetyltransferase from agrobacterium tumefaciens
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	2.34977492703662	bayes_pls_golite062009
transferase activity	1.85190002724385	bayes_pls_golite062009
transferase activity, transferring acyl groups	1.75772333794819	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	1.63399963366073	bayes_pls_golite062009
acyltransferase activity	1.60091210227059	bayes_pls_golite062009
N-acyltransferase activity	1.18143103040425	bayes_pls_golite062009
acetyltransferase activity	1.12147423121182	bayes_pls_golite062009
N-acetyltransferase activity	0.796917859235554	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: