YRC Public Data Repository - Protein Structure Prediction

Protein:	RECX_LEGPL
Organism:	Legionella pneumophila str. Lens
Length:	150 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RECX_LEGPL.

Description	E-value	Query Range	Subject Range
gi\|161723248 - gi\|161723248\|ref\|YP_095826.2\| recombination regulator RecX [Legionella pneumophila subsp. pneumophil... RECX_LEGPN - Regulatory protein RecX OS=Legionella pneumophila GN=recX PE=3 SV=2 RECX_LEGPC - Regulatory protein RecX OS=Legionella pneumophila (strain Corby) GN=recX PE=3 SV=1 RECX_LEGPA - Regulatory protein RecX OS=Legionella pneumophila (strain Paris) GN=recX PE=3 SV=1	160.0	[0..1]	[150..1]
gi\|90416731, gi\|... - gi\|90416731\|ref\|ZP_01224661.1\| hypothetical protein GB2207_03749 [marine gamma proteobacterium HTCC2... gi\|90416731\|ref\|... - hypothetical protein GB2207_03749 [marine gamma proteobacterium HTCC2207]	154.0	[0..2]	[147..11]
RECX_VIBVY - Regulatory protein RecX OS=Vibrio vulnificus (strain YJ016) GN=recX PE=3 SV=1	151.0	[0..1]	[143..9]
RECX_VIBVU - Regulatory protein recX OS=Vibrio vulnificus GN=recX PE=3 SV=1 RECX_VIBVU - Regulatory protein RecX OS=Vibrio vulnificus (strain CMCP6) GN=recX PE=3 SV=1	150.0	[0..1]	[143..9]
gi\|46128815 - gi\|46128815\|ref\|ZP_00201941.1\| COG2137: Uncharacterized protein conserved in bacteria [Haemophilus i... RECX_HAEIE - Regulatory protein RecX OS=Haemophilus influenzae (strain PittEE) GN=recX PE=3 SV=1 gi\|229809554, gi... - gi\|229847528\|ref\|ZP_04467621.1\| recombination regulator RecX [Haemophilus influenzae 7P49H1], gi\|229...	149.0	[0..4]	[149..5]
gi\|91227830, gi\|... - gi\|91227830\|ref\|ZP_01262003.1\| RecA regulator RecX [Vibrio alginolyticus 12G01], gi\|91188340\|gb\|EAS7...	149.0	[0..5]	[147..44]
RECX_HAEIN - Regulatory protein RecX OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=rec... RECX_HAEIN - Regulatory protein recX OS=Haemophilus influenzae GN=recX PE=3 SV=2	149.0	[0..4]	[149..5]
gi\|77975909, gi\|... - gi\|77975909\|ref\|ZP_00831442.1\| COG2137: Uncharacterized protein conserved in bacteria [Yersinia fred...	148.0	[0..1]	[146..1]
gi\|77958682, gi\|... - gi\|77958682\|ref\|ZP_00822711.1\| COG2137: Uncharacterized protein conserved in bacteria [Yersinia berc...	147.0	[0..1]	[146..1]
gi\|90412108, gi\|... - gi\|90412108\|ref\|ZP_01220115.1\| RecA regulator RecX [Photobacterium profundum 3TCK], gi\|90327086\|gb\|E...	145.0	[0..4]	[147..11]

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Predicted Domain #1

Region A:
Residues: [1-150]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKAFDSALR LLSRREYSAM ELCDKLKQKG FNLHDVQNAL NECKRLGYQS DERYVESYIR  60
   61 ARIHQGYGPL KIRQELKNKG IDPDLIQSVL HQEKDNWVNY ALRAWEKKFK RQDDFSYSEM 120
  121 QKQHRFLLYR GFDRDVISKV FKEVKSSYLI

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	0.999
Match:	2gxgA
Description:	No description for 2gxgA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits