YRC Public Data Repository - Protein Structure Prediction

Protein:	DSBB_ACIAD
Organism:	Acinetobacter sp. ADP1
Length:	171 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DSBB_ACIAD.

Description	E-value	Query Range	Subject Range
gi\|167049118, gi... - gi\|167401422\|ref\|ZP_02306919.1\| disulfide bond formation protein DsbB [Yersinia pestis biovar Antiqu... gi\|21959020, gi\|... - gi\|22126066\|ref\|NP_669489.1\| disulfide bond formation protein B [Yersinia pestis KIM], gi\|21959020\|g... gi\|45441745, gi\|... - gi\|45441745\|ref\|NP_993284.1\| disulfide bond formation protein B [Yersinia pestis biovar Microtus str...	152.0	[0..6]	[169..28]

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Predicted Domain #1

Region A:
Residues: [1-171]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQWSYRFVSG LLVLASIVGM TFALYLEHFK GLEPCPLCIF QRVGLMAMGI VALIAFLHNP  60
   61 VSNAFKRVYA FLATLGILWS VGVAIRHVWL QTLPPDQVPS CGPGLNYLLD ALPLKTVLQQ 120
  121 VLQGSGECAA IHWTFLGQSL PVWSLAYFSL ILLVCVWQLL RRYPVIVTKK K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.522879
Match:	2hi7B
Description:	No description for 2hi7B was found.

Predicted functions:

Term	Confidence	Notes
disulfide oxidoreductase activity	0.912395958053277	bayes_pls_golite062009
binding	0.772353333465834	bayes_pls_golite062009
catalytic activity	0.545407789079971	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: