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View Structure Prediction Details

Protein: gi|50084364, gi|...
Organism: Acinetobacter sp. ADP1
Length: 233 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50084364, gi|....

Description E-value Query
Range
Subject
Range
gi|110637695, gi... - gi|110637695|ref|YP_677902.1| integral membrane protein [Cytophaga hutchinsonii ATCC 33406], gi|1102...
gi|48855117 - gi|48855117|ref|ZP_00309277.1| COG1814: Uncharacterized membrane protein [Cytophaga hutchinsonii]
229.0 [0..1] [230..2]

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Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYSHHAEDH YIHRTGWLRA SVLGANDGII SVTSLVMGMA ASGASSHTLF IACLAGLISG  60
   61 ATSMAAGEYV SVQSQKDIEH ADLKFEAREL EKNPHLELDE LTIIYIRRGL APELAREVAI 120
  121 QLTEKDALEA HARDE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [136-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IGILEQTAAR PIQAALSSAL SFSLGALCPM LAILFSPESS VSTVVLTVGI ISLACMGALS  60
   61 SYFAGTSLWK GSLRITVWGI IAMLFSSWIG SFFNVTPL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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